Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AL162431.4-201ENST00000604674 411 ntBASIC6□□□□□ -1.45
CTDP1Q9Y5B0 AC124312.4-201ENST00000605533 310 ntBASIC6□□□□□ -1.45
CTDP1Q9Y5B0 AC009237.15-201ENST00000610252 501 ntBASIC6□□□□□ -1.45
CTDP1Q9Y5B0 OR1S1-201ENST00000624470 978 ntBASIC6□□□□□ -1.45
CTDP1Q9Y5B0 AC010608.2-201ENST00000624830 470 ntBASIC6□□□□□ -1.45
CTDP1Q9Y5B0 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 ZNF542P-204ENST00000482727 1305 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AL049737.1-201ENST00000413920 1403 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 INTS6P1-201ENST00000504674 2530 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 PHKBP1-201ENST00000450951 1951 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 CASC19-221ENST00000641309 1382 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 SNORA51.8-201ENST00000384234 132 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 FABP12P1-201ENST00000401911 322 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AL109941.1-201ENST00000401925 229 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 GSTA8P-201ENST00000404253 637 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 Y_RNA.619-201ENST00000410951 90 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 RBMY2KP-201ENST00000418221 992 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 RPS26P13-201ENST00000419030 330 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 EI24P4-201ENST00000423683 1078 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AC092393.1-201ENST00000439625 742 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 MTND5P2-201ENST00000442927 1142 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 OR51B8P-201ENST00000449892 769 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AC234781.3-201ENST00000452540 973 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AC069528.1-202ENST00000482888 637 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 IGBP1P4-201ENST00000503202 879 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AC091860.1-201ENST00000505723 432 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 MTND5P13-201ENST00000513046 1079 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AC006427.1-201ENST00000514359 712 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 RFPL4AP5-201ENST00000514977 504 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AC022069.1-201ENST00000582910 658 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AP001269.3-201ENST00000588718 329 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AC009237.13-201ENST00000603193 276 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AC080078.2-201ENST00000603766 501 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AC087752.4-201ENST00000605911 462 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AL022394.1-201ENST00000606979 292 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AL450489.1-201ENST00000612071 468 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AL162574.1-201ENST00000615702 950 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AL157770.1-201ENST00000623049 439 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AC000095.2-202ENST00000637415 154 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CTDP1Q9Y5B0 AL450326.2-201ENST00000421913 1962 ntBASIC5.98□□□□□ -1.45
CTDP1Q9Y5B0 CASC19-284ENST00000642142 1868 ntBASIC5.98□□□□□ -1.45
CTDP1Q9Y5B0 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CTDP1Q9Y5B0 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CTDP1Q9Y5B0 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.98□□□□□ -1.45
CTDP1Q9Y5B0 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.98□□□□□ -1.45
CTDP1Q9Y5B0 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CTDP1Q9Y5B0 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CTDP1Q9Y5B0 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CTDP1Q9Y5B0 RN7SKP185-201ENST00000362813 326 ntBASIC5.98□□□□□ -1.45
CTDP1Q9Y5B0 SNORA70.6-201ENST00000383934 134 ntBASIC5.98□□□□□ -1.45
CTDP1Q9Y5B0 Z97832.1-201ENST00000402490 328 ntBASIC5.98□□□□□ -1.45
CTDP1Q9Y5B0 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.98□□□□□ -1.45
CTDP1Q9Y5B0 SETP15-201ENST00000412724 337 ntBASIC5.98□□□□□ -1.45
CTDP1Q9Y5B0 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.98□□□□□ -1.45
CTDP1Q9Y5B0 AC104837.2-201ENST00000427236 424 ntBASIC5.98□□□□□ -1.45
CTDP1Q9Y5B0 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CTDP1Q9Y5B0 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.98□□□□□ -1.45
CTDP1Q9Y5B0 AC138761.5-201ENST00000433967 325 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms