Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.3□□□□□ -1.72
NDE1Q9NXR1 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NDE1Q9NXR1 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NDE1Q9NXR1 GJA6P-201ENST00000415117 1042 ntBASIC4.3□□□□□ -1.72
NDE1Q9NXR1 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.3□□□□□ -1.72
NDE1Q9NXR1 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NDE1Q9NXR1 AL391219.1-201ENST00000422570 483 ntBASIC4.3□□□□□ -1.72
NDE1Q9NXR1 CFL1P1-202ENST00000432948 411 ntBASIC4.3□□□□□ -1.72
NDE1Q9NXR1 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.3□□□□□ -1.72
NDE1Q9NXR1 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.3□□□□□ -1.72
NDE1Q9NXR1 ABCF2P2-201ENST00000450549 296 ntBASIC4.3□□□□□ -1.72
NDE1Q9NXR1 RPL23AP23-201ENST00000452590 471 ntBASIC4.3□□□□□ -1.72
NDE1Q9NXR1 CLIC4P1-201ENST00000453177 535 ntBASIC4.3□□□□□ -1.72
NDE1Q9NXR1 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.3□□□□□ -1.72
NDE1Q9NXR1 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.3□□□□□ -1.72
NDE1Q9NXR1 RPL23AP71-201ENST00000470966 469 ntBASIC4.3□□□□□ -1.72
NDE1Q9NXR1 AC104763.1-201ENST00000475274 360 ntBASIC4.3□□□□□ -1.72
NDE1Q9NXR1 RN7SL177P-201ENST00000476596 299 ntBASIC4.3□□□□□ -1.72
NDE1Q9NXR1 SUMO1P1-201ENST00000497904 306 ntBASIC4.3□□□□□ -1.72
NDE1Q9NXR1 MTATP6P9-201ENST00000515039 680 ntBASIC4.3□□□□□ -1.72
NDE1Q9NXR1 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.3□□□□□ -1.72
NDE1Q9NXR1 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.3□□□□□ -1.72
NDE1Q9NXR1 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.3□□□□□ -1.72
NDE1Q9NXR1 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.3□□□□□ -1.72
NDE1Q9NXR1 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.3□□□□□ -1.72
NDE1Q9NXR1 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.3□□□□□ -1.72
NDE1Q9NXR1 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.3□□□□□ -1.72
NDE1Q9NXR1 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.3□□□□□ -1.72
NDE1Q9NXR1 RN7SL652P-201ENST00000577769 300 ntBASIC4.3□□□□□ -1.72
NDE1Q9NXR1 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.3□□□□□ -1.72
NDE1Q9NXR1 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
NDE1Q9NXR1 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.3□□□□□ -1.72
NDE1Q9NXR1 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.3□□□□□ -1.72
NDE1Q9NXR1 AC011453.2-201ENST00000603737 729 ntBASIC4.3□□□□□ -1.72
NDE1Q9NXR1 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.3□□□□□ -1.72
NDE1Q9NXR1 Z98200.1-201ENST00000607298 470 ntBASIC4.3□□□□□ -1.72
NDE1Q9NXR1 AL355816.2-201ENST00000610049 647 ntBASIC4.3□□□□□ -1.72
NDE1Q9NXR1 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.3□□□□□ -1.72
NDE1Q9NXR1 AC019278.1-201ENST00000623516 479 ntBASIC4.3□□□□□ -1.72
NDE1Q9NXR1 AL356118.1-201ENST00000635272 1078 ntBASIC4.3□□□□□ -1.72
NDE1Q9NXR1 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.3□□□□□ -1.72
NDE1Q9NXR1 LINC00622-201ENST00000562811 1570 ntBASIC4.3□□□□□ -1.72
NDE1Q9NXR1 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.3□□□□□ -1.72
NDE1Q9NXR1 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 MFSD8-242ENST00000641690 4199 ntBASIC4.29□□□□□ -1.72
NDE1Q9NXR1 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 A2MP1-204ENST00000566278 4130 ntBASIC4.29□□□□□ -1.72
NDE1Q9NXR1 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.29□□□□□ -1.72
NDE1Q9NXR1 OR3A2-201ENST00000408891 1076 ntBASIC4.29□□□□□ -1.72
NDE1Q9NXR1 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 RPL35AP24-201ENST00000413846 330 ntBASIC4.29□□□□□ -1.72
NDE1Q9NXR1 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 AC140479.3-201ENST00000418944 1126 ntBASIC4.29□□□□□ -1.72
NDE1Q9NXR1 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 NDUFA5P10-201ENST00000432147 357 ntBASIC4.29□□□□□ -1.72
NDE1Q9NXR1 RPS20P1-201ENST00000434853 354 ntBASIC4.29□□□□□ -1.72
NDE1Q9NXR1 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 AC108463.1-201ENST00000450258 347 ntBASIC4.29□□□□□ -1.72
NDE1Q9NXR1 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 RN7SL585P-201ENST00000470538 280 ntBASIC4.29□□□□□ -1.72
NDE1Q9NXR1 GAPDHP56-201ENST00000506031 988 ntBASIC4.29□□□□□ -1.72
NDE1Q9NXR1 MTCO3P27-201ENST00000514397 196 ntBASIC4.29□□□□□ -1.72
NDE1Q9NXR1 RNA5SP497-201ENST00000516081 97 ntBASIC4.29□□□□□ -1.72
NDE1Q9NXR1 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 AC104115.2-201ENST00000523026 687 ntBASIC4.29□□□□□ -1.72
NDE1Q9NXR1 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 DEFB109D-201ENST00000529497 240 ntBASIC4.29□□□□□ -1.72
NDE1Q9NXR1 AC107016.1-201ENST00000550463 337 ntBASIC4.29□□□□□ -1.72
NDE1Q9NXR1 AC023158.1-201ENST00000561632 1025 ntBASIC4.29□□□□□ -1.72
NDE1Q9NXR1 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 AC006116.7-201ENST00000590141 756 ntBASIC4.29□□□□□ -1.72
NDE1Q9NXR1 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.29□□□□□ -1.72
NDE1Q9NXR1 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.29□□□□□ -1.72
NDE1Q9NXR1 AC097504.2-201ENST00000608088 454 ntBASIC4.29□□□□□ -1.72
NDE1Q9NXR1 AF129408.1-201ENST00000608767 431 ntBASIC4.29□□□□□ -1.72
NDE1Q9NXR1 AC004241.3-201ENST00000611728 517 ntBASIC4.29□□□□□ -1.72
NDE1Q9NXR1 AC092159.4-201ENST00000624944 550 ntBASIC4.29□□□□□ -1.72
NDE1Q9NXR1 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
NDE1Q9NXR1 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms