Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NXF3Q9H4D5 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NXF3Q9H4D5 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NXF3Q9H4D5 Y_RNA.62-201ENST00000362840 99 ntBASIC4.51□□□□□ -1.69
NXF3Q9H4D5 AL512430.2-201ENST00000406786 339 ntBASIC4.51□□□□□ -1.69
NXF3Q9H4D5 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.51□□□□□ -1.69
NXF3Q9H4D5 RBMY1KP-201ENST00000423480 476 ntBASIC4.51□□□□□ -1.69
NXF3Q9H4D5 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.51□□□□□ -1.69
NXF3Q9H4D5 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.51□□□□□ -1.69
NXF3Q9H4D5 DEFB109F-201ENST00000491870 277 ntBASIC4.51□□□□□ -1.69
NXF3Q9H4D5 BNIP3P41-201ENST00000503774 571 ntBASIC4.51□□□□□ -1.69
NXF3Q9H4D5 HPRT1P2-201ENST00000505250 544 ntBASIC4.51□□□□□ -1.69
NXF3Q9H4D5 HMGB1P19-201ENST00000517578 577 ntBASIC4.51□□□□□ -1.69
NXF3Q9H4D5 AC134698.5-201ENST00000519444 336 ntBASIC4.51□□□□□ -1.69
NXF3Q9H4D5 PHBP17-201ENST00000528576 541 ntBASIC4.51□□□□□ -1.69
NXF3Q9H4D5 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.51□□□□□ -1.69
NXF3Q9H4D5 SULT1C2P2-201ENST00000562517 294 ntBASIC4.51□□□□□ -1.69
NXF3Q9H4D5 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.51□□□□□ -1.69
NXF3Q9H4D5 SLC25A36P1-201ENST00000590111 465 ntBASIC4.51□□□□□ -1.69
NXF3Q9H4D5 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NXF3Q9H4D5 AC133552.5-201ENST00000604266 540 ntBASIC4.51□□□□□ -1.69
NXF3Q9H4D5 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.51□□□□□ -1.69
NXF3Q9H4D5 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NXF3Q9H4D5 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NXF3Q9H4D5 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
NXF3Q9H4D5 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.5□□□□□ -1.69
NXF3Q9H4D5 AC067945.1-201ENST00000342609 618 ntBASIC4.5□□□□□ -1.69
NXF3Q9H4D5 IL6STP1-201ENST00000346911 1020 ntBASIC4.5□□□□□ -1.69
NXF3Q9H4D5 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NXF3Q9H4D5 AC025750.1-201ENST00000399891 379 ntBASIC4.5□□□□□ -1.69
NXF3Q9H4D5 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.5□□□□□ -1.69
NXF3Q9H4D5 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.5□□□□□ -1.69
NXF3Q9H4D5 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.5□□□□□ -1.69
NXF3Q9H4D5 AC004448.2-201ENST00000422360 586 ntBASIC4.5□□□□□ -1.69
NXF3Q9H4D5 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.5□□□□□ -1.69
NXF3Q9H4D5 AC006011.1-201ENST00000442758 349 ntBASIC4.5□□□□□ -1.69
NXF3Q9H4D5 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.5□□□□□ -1.69
NXF3Q9H4D5 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.5□□□□□ -1.69
NXF3Q9H4D5 AC021146.3-201ENST00000511911 260 ntBASIC4.5□□□□□ -1.69
NXF3Q9H4D5 FTH1P21-201ENST00000512179 511 ntBASIC4.5□□□□□ -1.69
NXF3Q9H4D5 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.5□□□□□ -1.69
NXF3Q9H4D5 OR7E10P-201ENST00000526420 991 ntBASIC4.5□□□□□ -1.69
NXF3Q9H4D5 SNORD39.2-201ENST00000579995 76 ntBASIC4.5□□□□□ -1.69
NXF3Q9H4D5 AC022916.3-201ENST00000592961 742 ntBASIC4.5□□□□□ -1.69
NXF3Q9H4D5 AC099676.1-201ENST00000608886 657 ntBASIC4.5□□□□□ -1.69
NXF3Q9H4D5 AP005212.4-201ENST00000614206 710 ntBASIC4.5□□□□□ -1.69
NXF3Q9H4D5 MIR6875-201ENST00000617506 72 ntBASIC4.5□□□□□ -1.69
NXF3Q9H4D5 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NXF3Q9H4D5 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
NXF3Q9H4D5 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.5□□□□□ -1.69
NXF3Q9H4D5 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
NXF3Q9H4D5 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 RNA5SP388-201ENST00000362584 119 ntBASIC4.49□□□□□ -1.69
NXF3Q9H4D5 RNA5SP513-201ENST00000364648 118 ntBASIC4.49□□□□□ -1.69
NXF3Q9H4D5 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 AC104297.1-201ENST00000393779 870 ntBASIC4.49□□□□□ -1.69
NXF3Q9H4D5 AP000357.1-201ENST00000409926 1165 ntBASIC4.49□□□□□ -1.69
NXF3Q9H4D5 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 AC115285.1-201ENST00000424879 736 ntBASIC4.49□□□□□ -1.69
NXF3Q9H4D5 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 UBE2V2P1-201ENST00000434717 398 ntBASIC4.49□□□□□ -1.69
NXF3Q9H4D5 HMGB3P9-201ENST00000441799 583 ntBASIC4.49□□□□□ -1.69
NXF3Q9H4D5 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 AC005008.1-201ENST00000456151 612 ntBASIC4.49□□□□□ -1.69
NXF3Q9H4D5 RN7SL817P-201ENST00000480777 288 ntBASIC4.49□□□□□ -1.69
NXF3Q9H4D5 TPT1P3-201ENST00000492841 512 ntBASIC4.49□□□□□ -1.69
NXF3Q9H4D5 HMGB3P14-201ENST00000494195 599 ntBASIC4.49□□□□□ -1.69
NXF3Q9H4D5 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 RN7SL703P-201ENST00000578485 302 ntBASIC4.49□□□□□ -1.69
NXF3Q9H4D5 AC023813.4-201ENST00000607580 580 ntBASIC4.49□□□□□ -1.69
NXF3Q9H4D5 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 USP9YP4-201ENST00000424401 1745 ntBASIC4.49□□□□□ -1.69
NXF3Q9H4D5 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.49□□□□□ -1.69
NXF3Q9H4D5 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 RNU1-64P-201ENST00000365443 163 ntBASIC4.48□□□□□ -1.69
NXF3Q9H4D5 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.48□□□□□ -1.69
NXF3Q9H4D5 OR13C3-201ENST00000374781 1108 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms