Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 WASF1P1-201ENST00000447560 1131 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 AC126182.1-201ENST00000478134 357 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 OR5H5P-201ENST00000503164 928 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 RNU6-405P-201ENST00000516637 110 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 MED28P5-201ENST00000528254 438 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 MIR1269B-201ENST00000580405 75 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 OR7E18P-201ENST00000592589 702 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 AC009237.13-201ENST00000603193 276 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 AC005034.5-201ENST00000604219 466 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 AC016717.3-201ENST00000624730 554 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 RPS4XP5-202ENST00000449995 1334 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 AC133552.1-201ENST00000569988 4007 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 AC097461.1-201ENST00000568928 2821 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AL359715.3-201ENST00000569267 2123 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AC004076.2-201ENST00000620532 3323 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AL672167.1-206ENST00000356293 943 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 RNU6-1200P-201ENST00000384162 107 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 SNORA5.1-201ENST00000384275 131 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 RNU1-149P-201ENST00000390870 161 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 BTF3P7-201ENST00000407097 488 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 RNU4-74P-201ENST00000411280 161 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 CEACAMP8-201ENST00000413902 580 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 VTA1P1-201ENST00000414044 866 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 MTATP6P27-201ENST00000416987 621 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 PTP4A1P1-201ENST00000420539 515 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AC108075.1-201ENST00000424692 529 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 RPS4XP16-201ENST00000427198 791 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AL606490.7-201ENST00000433136 191 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AC004865.1-201ENST00000442276 1003 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 MRPL35P2-201ENST00000448009 511 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 RPS23P9-201ENST00000448848 438 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 CCRL1P1-201ENST00000449542 1053 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AC079168.1-201ENST00000458741 345 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 ARL4AP1-201ENST00000503220 705 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 BNIP3P41-201ENST00000503774 571 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 PGAM1P13-201ENST00000507497 754 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AC091912.1-201ENST00000511351 248 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 RFPL4AP3-201ENST00000515267 345 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 RNU6-528P-201ENST00000516926 100 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 MTCYBP19-201ENST00000517463 1124 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AC104383.1-201ENST00000530297 370 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AC008147.3-201ENST00000548666 354 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 NPM1P47-201ENST00000560843 856 ntBASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP1Q96SZ6 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms