Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
CDK5RAP2Q96SN8 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDK5RAP2Q96SN8 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDK5RAP2Q96SN8 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDK5RAP2Q96SN8 FAM91A3P-201ENST00000456826 2544 ntBASIC4.71□□□□□ -1.65
CDK5RAP2Q96SN8 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CDK5RAP2Q96SN8 RNA5SP119-201ENST00000362715 117 ntBASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 SNORA62.3-201ENST00000365110 153 ntBASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 ATP5F1P3-201ENST00000397213 657 ntBASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 AL590704.1-201ENST00000402856 794 ntBASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 AC079171.1-201ENST00000568788 914 ntBASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 MIR5685-201ENST00000579080 79 ntBASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 AC015726.1-201ENST00000602353 681 ntBASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 AC008739.3-201ENST00000603262 127 ntBASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 SOD2P1-201ENST00000396543 562 ntBASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 AC007389.2-201ENST00000434630 306 ntBASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 NDUFA5P2-201ENST00000519723 344 ntBASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 IGKV2D-19-201ENST00000523346 262 ntBASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 UBTFL9-201ENST00000534504 1148 ntBASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 RPL23AP87-202ENST00000573039 466 ntBASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 AC073530.2-201ENST00000623987 261 ntBASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.71□□□□□ -1.66
CDK5RAP2Q96SN8 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 VDAC2P1-201ENST00000399358 958 ntBASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 RNA5SP306-201ENST00000411087 107 ntBASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 AC010460.1-201ENST00000507087 466 ntBASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 RNU7-143P-201ENST00000516781 65 ntBASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 AC109635.6-201ENST00000525487 1113 ntBASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 AC005255.1-201ENST00000593748 216 ntBASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 MAPK10-253ENST00000641010 4072 ntBASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CDK5RAP2Q96SN8 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 GVINP1-202ENST00000531871 7271 ntBASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 RNA5SP513-201ENST00000364648 118 ntBASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 RNA5SP146-201ENST00000410743 123 ntBASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 AC011742.1-201ENST00000431448 434 ntBASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 AL500522.2-201ENST00000448562 343 ntBASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 EIF2S2P5-201ENST00000457635 968 ntBASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 RPL7P15-201ENST00000461190 712 ntBASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 RNU1-30P-201ENST00000606575 163 ntBASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 SETP15-201ENST00000412724 337 ntBASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 PDSS1P1-201ENST00000422953 1114 ntBASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 AC022795.1-201ENST00000473808 480 ntBASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 RN7SL323P-201ENST00000494712 295 ntBASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.69□□□□□ -1.66
CDK5RAP2Q96SN8 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 383.9 ms