Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 MIR3176-201ENST00000582210 90 ntBASIC3.15□□□□□ -1.91
AP1S3Q96PC3 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 AC005255.1-201ENST00000593748 216 ntBASIC3.15□□□□□ -1.91
AP1S3Q96PC3 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 AC023043.4-201ENST00000612081 449 ntBASIC3.15□□□□□ -1.91
AP1S3Q96PC3 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.15□□□□□ -1.91
AP1S3Q96PC3 AC008785.1-201ENST00000624475 456 ntBASIC3.15□□□□□ -1.91
AP1S3Q96PC3 AP000843.1-201ENST00000624880 701 ntBASIC3.15□□□□□ -1.91
AP1S3Q96PC3 MIR7153-201ENST00000637758 57 ntBASIC3.15□□□□□ -1.91
AP1S3Q96PC3 FP325313.1-201ENST00000638228 703 ntBASIC3.15□□□□□ -1.91
AP1S3Q96PC3 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 RN7SKP149-201ENST00000363008 344 ntBASIC3.14□□□□□ -1.91
AP1S3Q96PC3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.14□□□□□ -1.91
AP1S3Q96PC3 MIR298-201ENST00000401212 88 ntBASIC3.14□□□□□ -1.91
AP1S3Q96PC3 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 AC004074.1-201ENST00000421810 1063 ntBASIC3.14□□□□□ -1.91
AP1S3Q96PC3 AL732292.1-201ENST00000426692 226 ntBASIC3.14□□□□□ -1.91
AP1S3Q96PC3 AC087650.1-201ENST00000431445 468 ntBASIC3.14□□□□□ -1.91
AP1S3Q96PC3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 AL162591.2-201ENST00000449634 317 ntBASIC3.14□□□□□ -1.91
AP1S3Q96PC3 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 HMGN2P7-201ENST00000456186 273 ntBASIC3.14□□□□□ -1.91
AP1S3Q96PC3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.14□□□□□ -1.91
AP1S3Q96PC3 RPL23AP14-201ENST00000468281 468 ntBASIC3.14□□□□□ -1.91
AP1S3Q96PC3 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 RNA5SP34-201ENST00000516887 130 ntBASIC3.14□□□□□ -1.91
AP1S3Q96PC3 IGLV2-28-201ENST00000520681 304 ntBASIC3.14□□□□□ -1.91
AP1S3Q96PC3 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 AC110743.1-201ENST00000584870 478 ntBASIC3.14□□□□□ -1.91
AP1S3Q96PC3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 AC128687.2-201ENST00000609657 566 ntBASIC3.14□□□□□ -1.91
AP1S3Q96PC3 AL133243.1-201ENST00000614487 366 ntBASIC3.14□□□□□ -1.91
AP1S3Q96PC3 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 AC138907.10-201ENST00000623708 983 ntBASIC3.14□□□□□ -1.91
AP1S3Q96PC3 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 AC244205.2-202ENST00000635781 342 ntBASIC3.14□□□□□ -1.91
AP1S3Q96PC3 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 AC100871.1-201ENST00000507871 1456 ntBASIC3.14□□□□□ -1.91
AP1S3Q96PC3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
AP1S3Q96PC3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 AC010132.2-201ENST00000295493 1043 ntBASIC3.13□□□□□ -1.91
AP1S3Q96PC3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 RNU4-34P-201ENST00000410431 124 ntBASIC3.13□□□□□ -1.91
AP1S3Q96PC3 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 RPL23AP89-201ENST00000439324 255 ntBASIC3.13□□□□□ -1.91
AP1S3Q96PC3 TXNP1-201ENST00000441872 371 ntBASIC3.13□□□□□ -1.91
AP1S3Q96PC3 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 RPL7P16-201ENST00000479738 738 ntBASIC3.13□□□□□ -1.91
AP1S3Q96PC3 AC011037.1-201ENST00000483964 558 ntBASIC3.13□□□□□ -1.91
AP1S3Q96PC3 RPL7P47-201ENST00000497299 556 ntBASIC3.13□□□□□ -1.91
AP1S3Q96PC3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 ATP1B1P1-201ENST00000509767 915 ntBASIC3.13□□□□□ -1.91
AP1S3Q96PC3 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 NDUFB4P9-201ENST00000511646 388 ntBASIC3.13□□□□□ -1.91
AP1S3Q96PC3 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 SMARCE1P4-201ENST00000523647 241 ntBASIC3.13□□□□□ -1.91
AP1S3Q96PC3 NPM1P35-201ENST00000533043 868 ntBASIC3.13□□□□□ -1.91
AP1S3Q96PC3 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 AC021483.2-201ENST00000567415 758 ntBASIC3.13□□□□□ -1.91
AP1S3Q96PC3 AC016180.1-201ENST00000567945 403 ntBASIC3.13□□□□□ -1.91
AP1S3Q96PC3 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 AC091042.1-201ENST00000579213 173 ntBASIC3.13□□□□□ -1.91
AP1S3Q96PC3 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.13□□□□□ -1.91
AP1S3Q96PC3 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms