Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 AC009263.1-201ENST00000441193 1239 ntBASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 KNOP1P3-201ENST00000446933 426 ntBASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 AC074386.1-201ENST00000476560 767 ntBASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 COX6B1P2-201ENST00000489624 230 ntBASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 RN7SL244P-201ENST00000493405 297 ntBASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 ENPP7P11-201ENST00000505915 627 ntBASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 ZNF321P-202ENST00000550843 495 ntBASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 EIF1P6-201ENST00000600054 334 ntBASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 AC105254.2-201ENST00000603636 436 ntBASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 AC116447.1-201ENST00000613153 453 ntBASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 MIR7973-1-201ENST00000614683 76 ntBASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 AC015908.5-201ENST00000623289 343 ntBASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 C4BPAP1-201ENST00000415474 1893 ntBASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 MTCO1P6-201ENST00000481192 1384 ntBASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 AL450326.2-201ENST00000421913 1962 ntBASIC5.66□□□□□ -1.5
CDK5RAP3Q96JB5 THAP12P4-201ENST00000528321 2266 ntBASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 AC011755.1-201ENST00000623763 2049 ntBASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 RNA5SP455-201ENST00000365190 119 ntBASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 AL049545.1-201ENST00000401856 572 ntBASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 RPF2P1-201ENST00000424137 906 ntBASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 RPS6P15-201ENST00000431996 751 ntBASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 AL163193.1-201ENST00000444895 788 ntBASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 AP000563.1-201ENST00000490865 758 ntBASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 AC034244.1-201ENST00000507687 207 ntBASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 COX6B1P5-201ENST00000509843 249 ntBASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 RN7SKP66-201ENST00000516681 231 ntBASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 AC105031.1-201ENST00000518550 476 ntBASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 AC018552.3-201ENST00000567416 561 ntBASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 MIR3691-201ENST00000578066 90 ntBASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 MIR5708-201ENST00000579723 85 ntBASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 AC021171.1-201ENST00000603137 706 ntBASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 AC021749.1-201ENST00000604322 607 ntBASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 AL139344.1-201ENST00000605228 195 ntBASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 AL512624.1-201ENST00000613638 469 ntBASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 U6.48-201ENST00000618523 106 ntBASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.65□□□□□ -1.5
CDK5RAP3Q96JB5 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDK5RAP3Q96JB5 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CDK5RAP3Q96JB5 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.65□□□□□ -1.51
CDK5RAP3Q96JB5 AC104446.1-201ENST00000613728 1321 ntBASIC5.65□□□□□ -1.51
CDK5RAP3Q96JB5 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CDK5RAP3Q96JB5 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.65□□□□□ -1.51
CDK5RAP3Q96JB5 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CDK5RAP3Q96JB5 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDK5RAP3Q96JB5 RNF6P1-201ENST00000444889 1784 ntBASIC5.65□□□□□ -1.51
CDK5RAP3Q96JB5 AC000367.1-201ENST00000452711 1766 ntBASIC5.65□□□□□ -1.51
CDK5RAP3Q96JB5 RARSP1-201ENST00000542842 1418 ntBASIC5.65□□□□□ -1.51
CDK5RAP3Q96JB5 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.65□□□□□ -1.51
CDK5RAP3Q96JB5 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.65□□□□□ -1.51
CDK5RAP3Q96JB5 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms