Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 MIR7151-201ENST00000617477 60 ntBASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 AC019278.1-201ENST00000623516 479 ntBASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 ZNF962P-201ENST00000443465 3140 ntBASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 AC063923.1-201ENST00000478982 1619 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 MFSD8-242ENST00000641690 4199 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 AC139713.2-215ENST00000641428 5037 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 NDUFB4P4-201ENST00000404822 243 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 MIR1179-201ENST00000408703 91 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 HSPE1P12-201ENST00000412576 301 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 GSTM3P2-201ENST00000412746 530 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 AL356968.2-201ENST00000412769 1257 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 RPS17P13-201ENST00000448974 407 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 EIF2S2P5-201ENST00000457635 968 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 AL352979.3-201ENST00000553515 247 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 HMGN2P47-201ENST00000559378 272 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 VPS35P1-201ENST00000563400 1518 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 AC092162.3-201ENST00000624511 1624 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 AC233968.1-201ENST00000611212 1300 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 EIF3EP2-201ENST00000423042 1814 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 OR11H4-201ENST00000315409 1082 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 AL590704.1-201ENST00000402856 794 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 HDGFP1-201ENST00000405943 252 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 SETP9-201ENST00000423837 832 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 AC008481.1-201ENST00000463278 396 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 AP000942.1-201ENST00000463969 747 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 AL133372.1-201ENST00000493565 745 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 PSMB7P1-201ENST00000556349 514 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 AL121772.2-201ENST00000614331 297 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 AP005264.7-201ENST00000625003 745 ntBASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SHROOM3Q8TF72 CDY3P-201ENST00000454543 1618 ntBASIC4.21□□□□□ -1.73
SHROOM3Q8TF72 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SHROOM3Q8TF72 RNU1-108P-201ENST00000362556 161 ntBASIC4.21□□□□□ -1.74
SHROOM3Q8TF72 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.21□□□□□ -1.74
SHROOM3Q8TF72 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.21□□□□□ -1.74
SHROOM3Q8TF72 AC011742.1-201ENST00000431448 434 ntBASIC4.21□□□□□ -1.74
SHROOM3Q8TF72 RPL38P1-201ENST00000460914 211 ntBASIC4.21□□□□□ -1.74
SHROOM3Q8TF72 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.21□□□□□ -1.74
SHROOM3Q8TF72 AC069240.1-201ENST00000548774 375 ntBASIC4.21□□□□□ -1.74
SHROOM3Q8TF72 AC093014.1-201ENST00000548926 724 ntBASIC4.21□□□□□ -1.74
SHROOM3Q8TF72 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.21□□□□□ -1.74
SHROOM3Q8TF72 MIR4433B-201ENST00000581329 102 ntBASIC4.21□□□□□ -1.74
SHROOM3Q8TF72 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.21□□□□□ -1.74
SHROOM3Q8TF72 AC015967.1-201ENST00000619893 476 ntBASIC4.21□□□□□ -1.74
SHROOM3Q8TF72 AC055839.1-201ENST00000634467 498 ntBASIC4.21□□□□□ -1.74
SHROOM3Q8TF72 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.21□□□□□ -1.74
SHROOM3Q8TF72 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SHROOM3Q8TF72 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SHROOM3Q8TF72 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.21□□□□□ -1.74
SHROOM3Q8TF72 AP000542.2-201ENST00000623199 6179 ntBASIC4.21□□□□□ -1.74
SHROOM3Q8TF72 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.21□□□□□ -1.74
SHROOM3Q8TF72 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SHROOM3Q8TF72 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SHROOM3Q8TF72 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SHROOM3Q8TF72 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 MAPK10-253ENST00000641010 4072 ntBASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 MIR491-201ENST00000384877 84 ntBASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 MIR449B-201ENST00000384995 97 ntBASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 CRYBB2P1-203ENST00000415709 538 ntBASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 NPM1P29-201ENST00000483112 803 ntBASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 AC146944.2-203ENST00000502493 354 ntBASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 AC139783.2-201ENST00000504847 1145 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms