Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 EIF4EP5-201ENST00000528228 640 ntBASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 AC068790.7-201ENST00000602347 528 ntBASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 AC024940.4-201ENST00000605507 246 ntBASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 AL161616.1-201ENST00000611867 286 ntBASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 AL713922.2-201ENST00000619384 716 ntBASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 AP005019.3-201ENST00000620418 560 ntBASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 AP001784.1-201ENST00000624107 428 ntBASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 AP001486.2-201ENST00000561652 5113 ntBASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLHC1Q8NHS4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 MIR3065-201ENST00000390137 79 ntBASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 AL035419.1-201ENST00000397037 564 ntBASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 RCC2P2-201ENST00000422174 918 ntBASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 AL359265.2-201ENST00000434367 631 ntBASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 AL772161.1-201ENST00000439130 476 ntBASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 AC073264.2-201ENST00000448886 166 ntBASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 AL162591.2-201ENST00000449634 317 ntBASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 AC018635.1-201ENST00000468292 1030 ntBASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 IGKV1-32-201ENST00000519290 311 ntBASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 TOMM20P2-201ENST00000540082 421 ntBASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 AC063949.1-201ENST00000552900 865 ntBASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 AC027176.2-201ENST00000559166 746 ntBASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 AC084783.1-201ENST00000565846 910 ntBASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 OR1AB1P-201ENST00000585564 761 ntBASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 AL139395.1-201ENST00000603662 160 ntBASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 AC079587.1-201ENST00000603846 277 ntBASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 Mico1.1-201ENST00000611698 204 ntBASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 AC100827.5-201ENST00000615883 426 ntBASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 uc_338.9-201ENST00000617424 182 ntBASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 C2orf27A-204ENST00000623058 969 ntBASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 AC011266.1-201ENST00000624119 3569 ntBASIC4.12□□□□□ -1.75
CLHC1Q8NHS4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 ZNF962P-201ENST00000443465 3140 ntBASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 MIR331-201ENST00000362302 94 ntBASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 MIR93-201ENST00000385024 80 ntBASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 AL161631.1-201ENST00000417933 486 ntBASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 AL353093.1-201ENST00000441292 436 ntBASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 AC011753.3-201ENST00000443436 406 ntBASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 CCRL1P1-201ENST00000449542 1053 ntBASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 RN7SL812P-201ENST00000493791 279 ntBASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 OR5D15P-201ENST00000531671 942 ntBASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 AL049539.1-201ENST00000611964 459 ntBASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 AL354950.1-201ENST00000614150 568 ntBASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 AL021997.2-201ENST00000615674 271 ntBASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 AL133370.2-201ENST00000619934 439 ntBASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms