Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.92□□□□□ -1.46
SYNE4Q8N205 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.92□□□□□ -1.46
SYNE4Q8N205 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.92□□□□□ -1.46
SYNE4Q8N205 AC010306.1-201ENST00000523223 1117 ntBASIC5.92□□□□□ -1.46
SYNE4Q8N205 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.92□□□□□ -1.46
SYNE4Q8N205 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.92□□□□□ -1.46
SYNE4Q8N205 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SYNE4Q8N205 AL121839.1-201ENST00000556233 1185 ntBASIC5.92□□□□□ -1.46
SYNE4Q8N205 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.92□□□□□ -1.46
SYNE4Q8N205 AC007224.1-201ENST00000564410 144 ntBASIC5.92□□□□□ -1.46
SYNE4Q8N205 AC084783.1-201ENST00000565846 910 ntBASIC5.92□□□□□ -1.46
SYNE4Q8N205 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SYNE4Q8N205 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.92□□□□□ -1.46
SYNE4Q8N205 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SYNE4Q8N205 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SYNE4Q8N205 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.92□□□□□ -1.46
SYNE4Q8N205 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SYNE4Q8N205 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.92□□□□□ -1.46
SYNE4Q8N205 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SYNE4Q8N205 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SYNE4Q8N205 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.92□□□□□ -1.46
SYNE4Q8N205 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SYNE4Q8N205 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SYNE4Q8N205 AC140134.1-201ENST00000511830 3544 ntBASIC5.91□□□□□ -1.46
SYNE4Q8N205 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SYNE4Q8N205 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SYNE4Q8N205 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SYNE4Q8N205 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SYNE4Q8N205 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 RN7SKP263-201ENST00000411194 309 ntBASIC5.91□□□□□ -1.46
SYNE4Q8N205 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SYNE4Q8N205 UQCRBP1-201ENST00000421129 336 ntBASIC5.91□□□□□ -1.46
SYNE4Q8N205 AL389915.1-201ENST00000422463 466 ntBASIC5.91□□□□□ -1.46
SYNE4Q8N205 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 AC021087.2-201ENST00000504656 1203 ntBASIC5.91□□□□□ -1.46
SYNE4Q8N205 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SYNE4Q8N205 NPM1P6-201ENST00000521088 871 ntBASIC5.91□□□□□ -1.46
SYNE4Q8N205 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 AP003717.3-201ENST00000544832 1180 ntBASIC5.91□□□□□ -1.46
SYNE4Q8N205 FKBP1BP1-201ENST00000553366 325 ntBASIC5.91□□□□□ -1.46
SYNE4Q8N205 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 AC103987.3-201ENST00000582071 292 ntBASIC5.91□□□□□ -1.46
SYNE4Q8N205 AC069061.3-201ENST00000582254 823 ntBASIC5.91□□□□□ -1.46
SYNE4Q8N205 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 AC067959.1-201ENST00000604334 379 ntBASIC5.91□□□□□ -1.46
SYNE4Q8N205 AL133507.1-201ENST00000605269 557 ntBASIC5.91□□□□□ -1.46
SYNE4Q8N205 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 AC004492.1-201ENST00000607036 742 ntBASIC5.91□□□□□ -1.46
SYNE4Q8N205 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 AC090617.9-201ENST00000623751 147 ntBASIC5.91□□□□□ -1.46
SYNE4Q8N205 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SYNE4Q8N205 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SYNE4Q8N205 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 TRIM51GP-201ENST00000534741 1350 ntBASIC5.91□□□□□ -1.46
SYNE4Q8N205 AC005261.4-201ENST00000600047 1385 ntBASIC5.91□□□□□ -1.46
SYNE4Q8N205 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SYNE4Q8N205 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SYNE4Q8N205 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SYNE4Q8N205 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
SYNE4Q8N205 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SYNE4Q8N205 AL078595.2-201ENST00000605309 1780 ntBASIC5.9□□□□□ -1.46
SYNE4Q8N205 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.9□□□□□ -1.46
SYNE4Q8N205 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SYNE4Q8N205 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.9□□□□□ -1.46
SYNE4Q8N205 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SYNE4Q8N205 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.9□□□□□ -1.46
SYNE4Q8N205 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SYNE4Q8N205 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
SYNE4Q8N205 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.9□□□□□ -1.46
SYNE4Q8N205 ADAM5-202ENST00000399789 1942 ntBASIC5.9□□□□□ -1.46
SYNE4Q8N205 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.9□□□□□ -1.46
SYNE4Q8N205 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.9□□□□□ -1.46
SYNE4Q8N205 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.9□□□□□ -1.46
SYNE4Q8N205 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
SYNE4Q8N205 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SYNE4Q8N205 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.9□□□□□ -1.46
SYNE4Q8N205 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.9□□□□□ -1.46
SYNE4Q8N205 HMGB1P13-201ENST00000406019 642 ntBASIC5.9□□□□□ -1.46
SYNE4Q8N205 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.9□□□□□ -1.46
SYNE4Q8N205 TIMM9P2-201ENST00000419324 266 ntBASIC5.9□□□□□ -1.46
SYNE4Q8N205 MTCO3P30-201ENST00000426425 670 ntBASIC5.9□□□□□ -1.46
SYNE4Q8N205 AC093422.3-201ENST00000428506 305 ntBASIC5.9□□□□□ -1.46
SYNE4Q8N205 ARF4P4-201ENST00000439608 520 ntBASIC5.9□□□□□ -1.46
SYNE4Q8N205 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms