Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 RNA5SP242-201ENST00000364171 118 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 RNA5SP394-201ENST00000364216 119 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 Y_RNA.554-201ENST00000384672 102 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 RPL23AP29-201ENST00000397284 453 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 EI24P3-201ENST00000399046 1062 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 RN7SKP206-201ENST00000410823 293 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 AL357752.1-201ENST00000412817 349 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 Z97055.1-201ENST00000419730 712 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 AL590399.2-201ENST00000427536 309 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 MTND1P2-201ENST00000430604 821 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 AC112206.1-201ENST00000468416 477 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 AC090013.1-201ENST00000485147 480 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 RPL32P33-201ENST00000487023 394 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 RPS27P23-201ENST00000487608 251 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 TRBV5-2-201ENST00000489095 273 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 RN7SL101P-201ENST00000496350 279 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 RN7SKP298-201ENST00000515950 94 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 RNU6-615P-201ENST00000516065 106 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 RN7SKP244-201ENST00000516513 307 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 RNU6-506P-201ENST00000516553 94 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 CBX3P7-201ENST00000532876 502 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 AP002453.2-201ENST00000533503 320 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 AC027544.3-201ENST00000535082 757 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 AC022404.1-201ENST00000555320 273 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 ELOCP28-201ENST00000590044 317 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 TAS2R6P-201ENST00000605022 826 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 AC005084.1-201ENST00000605160 304 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 LARP7P1-201ENST00000605576 316 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 AC090607.5-201ENST00000615692 224 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 AC023509.5-201ENST00000617434 807 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 AC079228.1-201ENST00000624774 1049 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 MKKS-204ENST00000639674 192 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 AC073544.1-201ENST00000600110 1595 ntBASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
TRIM48Q8IWZ4 MFSD8-219ENST00000641228 2559 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 OR9G4-201ENST00000302957 984 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 RNA5SP46-201ENST00000362370 120 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 RNU6-433P-201ENST00000363216 104 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 OR52E6-202ENST00000379946 954 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 Y_RNA.390-201ENST00000383932 102 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 RNU6-316P-201ENST00000391027 107 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 AL512422.1-201ENST00000407033 553 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 BOLA3P4-201ENST00000418151 400 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 AC093155.2-201ENST00000420734 937 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 RPL7P4-203ENST00000430239 730 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 AL513175.1-201ENST00000431492 780 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 AC122718.1-201ENST00000439448 744 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 EEF1B2P6-201ENST00000445713 673 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 OR7E116P-201ENST00000448529 957 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms