Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC096947.1-201ENST00000603233 470 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AC069431.2-201ENST00000604149 1099 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AC073387.2-201ENST00000604797 784 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AC006946.3-201ENST00000609791 756 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 FAM27B-201ENST00000610601 213 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AC023509.5-201ENST00000617434 807 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AC084824.4-201ENST00000620106 731 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AC091046.2-201ENST00000620775 665 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AC019206.1-201ENST00000621938 425 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 LINC01808-202ENST00000641680 1116 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 AC006042.3-201ENST00000454684 1469 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 NSRP1P1-201ENST00000444067 1693 ntBASIC5.3□□□□□ -1.56
HERC6Q8IVU3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HERC6Q8IVU3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 AC009229.4-201ENST00000623854 1947 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 AC046144.1-201ENST00000478559 1853 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 RNA5SP515-201ENST00000364570 118 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 U3.30-201ENST00000391308 210 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 MTND4P11-201ENST00000417020 1058 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 FABP7P1-201ENST00000424004 391 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 TPTE2P6-202ENST00000445572 1007 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 AL050341.1-201ENST00000447743 313 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 DUXAP8-207ENST00000456786 622 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 AC091180.1-201ENST00000462104 372 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 AC018635.1-201ENST00000468292 1030 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 AC010618.1-201ENST00000469924 477 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 RN7SL809P-201ENST00000482040 297 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 AL049874.2-201ENST00000492636 288 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 IGKV2-36-201ENST00000519999 223 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 AC124293.1-201ENST00000530034 493 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 AC006518.2-201ENST00000542513 940 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 AL109766.1-201ENST00000555080 552 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 AC127024.5-201ENST00000580085 462 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 AL022067.1-201ENST00000602426 454 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 AL137072.1-201ENST00000603444 466 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 AC005191.1-201ENST00000603950 358 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 DUXAP10-204ENST00000612052 616 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 MIR6716-201ENST00000613413 80 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 AL122125.1-201ENST00000616999 600 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 AP001005.3-201ENST00000622049 129 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 AC139713.2-210ENST00000641741 992 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 AL592148.3-201ENST00000608771 2646 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.29□□□□□ -1.56
HERC6Q8IVU3 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.29□□□□□ -1.56
HERC6Q8IVU3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 AC008079.2-201ENST00000623543 20396 ntBASIC5.28□□□□□ -1.56
HERC6Q8IVU3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 RNU6-549P-201ENST00000384433 107 ntBASIC5.28□□□□□ -1.56
HERC6Q8IVU3 AL603865.2-201ENST00000401679 213 ntBASIC5.28□□□□□ -1.56
HERC6Q8IVU3 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.28□□□□□ -1.56
HERC6Q8IVU3 GAPDHP49-201ENST00000421421 961 ntBASIC5.28□□□□□ -1.56
HERC6Q8IVU3 RPEP3-201ENST00000425462 676 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms