Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 RPS29P10-201ENST00000439197 166 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC38Q502W7 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 GEMIN8P3-201ENST00000445417 720 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 EIF2S2P2-201ENST00000447161 982 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 ZNF886P-201ENST00000450781 723 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 AC092155.2-201ENST00000454675 477 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 AL356981.1-201ENST00000454879 684 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC38Q502W7 UBA52P3-201ENST00000491303 382 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 AC073073.1-201ENST00000493920 463 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 AC134050.1-201ENST00000495088 933 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 RPL7L1P13-201ENST00000511702 739 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 AC012400.1-201ENST00000518452 381 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC38Q502W7 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 RN7SL176P-201ENST00000580352 264 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 AC009163.6-201ENST00000612367 342 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 AC243756.2-201ENST00000618406 463 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 AC005261.4-201ENST00000600047 1385 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 AC000367.1-201ENST00000452711 1766 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC38Q502W7 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC38Q502W7 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CCDC38Q502W7 CYP1D1P-201ENST00000416662 1433 ntBASIC5.23□□□□□ -1.57
CCDC38Q502W7 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC38Q502W7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC38Q502W7 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC38Q502W7 AC011155.1-201ENST00000316512 456 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC38Q502W7 U3.3-201ENST00000362986 216 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 SNORA67-201ENST00000384423 137 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 RNU6-906P-201ENST00000384700 70 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 Z75741.2-201ENST00000417272 1167 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC38Q502W7 RAC1P8-201ENST00000427086 527 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 HIGD1AP12-201ENST00000427832 281 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC38Q502W7 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.22□□□□□ -1.57
CCDC38Q502W7 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC38Q502W7 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC38Q502W7 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC38Q502W7 HMGB1P48-201ENST00000446155 598 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 AC112492.1-201ENST00000449607 712 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC38Q502W7 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC38Q502W7 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC38Q502W7 AL445433.1-201ENST00000457507 257 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 AC091180.1-201ENST00000462104 372 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 RPL7AP28-201ENST00000464513 571 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 AC126121.1-201ENST00000482313 553 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC38Q502W7 FTH1P24-201ENST00000503502 462 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 AC093720.1-201ENST00000505681 714 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 RPS4XP20-201ENST00000505751 772 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 PGAM1P13-201ENST00000507497 754 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 AF279873.1-201ENST00000523393 313 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.22□□□□□ -1.57
CCDC38Q502W7 AC063949.1-201ENST00000552900 865 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC38Q502W7 AC007225.2-201ENST00000562529 256 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 AGGF1P5-201ENST00000567900 919 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 MIR5708-201ENST00000579723 85 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC38Q502W7 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC38Q502W7 AC006116.5-201ENST00000591936 559 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 AL020997.3-201ENST00000602843 359 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 AL035411.2-201ENST00000604022 421 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 AL445435.1-201ENST00000604232 665 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 AC090948.2-201ENST00000607363 564 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC38Q502W7 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.22□□□□□ -1.57
CCDC38Q502W7 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC38Q502W7 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.22□□□□□ -1.57
CCDC38Q502W7 AC008993.2-201ENST00000631744 806 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC38Q502W7 ZNF663P-202ENST00000641770 1131 ntBASIC5.22□□□□□ -1.57
CCDC38Q502W7 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CCDC38Q502W7 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC38Q502W7 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms