Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.36□□□□□ -1.71
PTPN20Q4JDL3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 OR52B1P-201ENST00000316506 909 ntBASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 RNU6-697P-201ENST00000363348 107 ntBASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 RNU4-7P-201ENST00000364758 141 ntBASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 MIR513A2-201ENST00000385249 127 ntBASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 RN7SKP33-201ENST00000410942 340 ntBASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 PGBD4P8-201ENST00000412993 562 ntBASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 COX6CP15-201ENST00000426313 211 ntBASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 MTCYBP14-201ENST00000457471 715 ntBASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 AC105918.1-201ENST00000474399 838 ntBASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 UBA52P3-201ENST00000491303 382 ntBASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 AC026979.1-201ENST00000492525 396 ntBASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 AC017037.1-201ENST00000508460 471 ntBASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 RN7SL600P-201ENST00000581811 299 ntBASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 AC011477.5-201ENST00000586571 259 ntBASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 MIR378J-201ENST00000611988 109 ntBASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 AC020763.5-201ENST00000623298 430 ntBASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 AP005264.7-201ENST00000625003 745 ntBASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN20Q4JDL3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 MARK2P15-201ENST00000432204 2186 ntBASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 RNU11-4P-201ENST00000391149 133 ntBASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 HMGB1P32-201ENST00000425971 565 ntBASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 NUTF2P3-201ENST00000448540 384 ntBASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 MTCO3P42-201ENST00000509488 518 ntBASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 HPRT1P1-201ENST00000509498 657 ntBASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 MTCO3P39-201ENST00000514812 518 ntBASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 RNU7-143P-201ENST00000516781 65 ntBASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 MTND1P6-201ENST00000523621 946 ntBASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 AC079171.1-201ENST00000568788 914 ntBASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 RPL23AP87-202ENST00000573039 466 ntBASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 AL023881.1-201ENST00000621088 301 ntBASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 AC095038.2-201ENST00000621464 1070 ntBASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 OR52H1-202ENST00000641796 1061 ntBASIC4.34□□□□□ -1.71
PTPN20Q4JDL3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.34□□□□□ -1.72
PTPN20Q4JDL3 AC016588.2-201ENST00000632484 3021 ntBASIC4.34□□□□□ -1.72
PTPN20Q4JDL3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.34□□□□□ -1.72
PTPN20Q4JDL3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PTPN20Q4JDL3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 RPL32P3-201ENST00000359025 275 ntBASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 AC019155.1-201ENST00000382242 574 ntBASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 Y_RNA.625-201ENST00000411256 107 ntBASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 AC234779.1-201ENST00000425910 285 ntBASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 VDAC1P6-201ENST00000430062 855 ntBASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 AL358472.1-201ENST00000431295 329 ntBASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 HMGB3P9-201ENST00000441799 583 ntBASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 AC010618.1-201ENST00000469924 477 ntBASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 RN7SL604P-201ENST00000492589 296 ntBASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 NPM1P6-201ENST00000521088 871 ntBASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 OR8X1P-201ENST00000534542 869 ntBASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 MIR5684-201ENST00000585074 65 ntBASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 AC090948.2-201ENST00000607363 564 ntBASIC4.33□□□□□ -1.72
PTPN20Q4JDL3 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms