Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.33□□□□□ -1.4
SOX4Q06945 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SOX4Q06945 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
SOX4Q06945 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SOX4Q06945 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SOX4Q06945 RPS3AP9-201ENST00000417027 792 ntBASIC6.33□□□□□ -1.4
SOX4Q06945 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.33□□□□□ -1.4
SOX4Q06945 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.33□□□□□ -1.4
SOX4Q06945 AC016027.5-201ENST00000427227 210 ntBASIC6.33□□□□□ -1.4
SOX4Q06945 RPL37P21-201ENST00000435890 276 ntBASIC6.33□□□□□ -1.4
SOX4Q06945 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.33□□□□□ -1.4
SOX4Q06945 BX248409.1-201ENST00000455497 255 ntBASIC6.33□□□□□ -1.4
SOX4Q06945 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.33□□□□□ -1.4
SOX4Q06945 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.33□□□□□ -1.4
SOX4Q06945 RPS23P6-201ENST00000466136 431 ntBASIC6.33□□□□□ -1.4
SOX4Q06945 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
SOX4Q06945 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.33□□□□□ -1.4
SOX4Q06945 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC6.33□□□□□ -1.4
SOX4Q06945 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC6.33□□□□□ -1.4
SOX4Q06945 AC111000.3-201ENST00000508057 576 ntBASIC6.33□□□□□ -1.4
SOX4Q06945 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.33□□□□□ -1.4
SOX4Q06945 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC6.33□□□□□ -1.4
SOX4Q06945 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC6.33□□□□□ -1.4
SOX4Q06945 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.33□□□□□ -1.4
SOX4Q06945 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC6.33□□□□□ -1.4
SOX4Q06945 AP001189.2-201ENST00000527320 189 ntBASIC6.33□□□□□ -1.4
SOX4Q06945 AP003072.1-201ENST00000531740 145 ntBASIC6.33□□□□□ -1.4
SOX4Q06945 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.33□□□□□ -1.4
SOX4Q06945 MIR5697-201ENST00000578045 78 ntBASIC6.33□□□□□ -1.4
SOX4Q06945 FAM106CP-201ENST00000582212 507 ntBASIC6.33□□□□□ -1.4
SOX4Q06945 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC6.33□□□□□ -1.4
SOX4Q06945 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC6.33□□□□□ -1.4
SOX4Q06945 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.33□□□□□ -1.4
SOX4Q06945 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC6.33□□□□□ -1.4
SOX4Q06945 LLPHP1-201ENST00000603571 367 ntBASIC6.33□□□□□ -1.4
SOX4Q06945 AL050343.2-201ENST00000607338 280 ntBASIC6.33□□□□□ -1.4
SOX4Q06945 RN7SL787P-201ENST00000613000 284 ntBASIC6.33□□□□□ -1.4
SOX4Q06945 AC093838.1-201ENST00000613014 469 ntBASIC6.33□□□□□ -1.4
SOX4Q06945 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.33□□□□□ -1.4
SOX4Q06945 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SOX4Q06945 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.33□□□□□ -1.4
SOX4Q06945 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
SOX4Q06945 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.33□□□□□ -1.4
SOX4Q06945 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.33□□□□□ -1.4
SOX4Q06945 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SOX4Q06945 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SOX4Q06945 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.33□□□□□ -1.4
SOX4Q06945 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SOX4Q06945 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
SOX4Q06945 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SOX4Q06945 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SOX4Q06945 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SOX4Q06945 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SOX4Q06945 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
SOX4Q06945 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SOX4Q06945 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SOX4Q06945 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SOX4Q06945 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.33□□□□□ -1.4
SOX4Q06945 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.32□□□□□ -1.4
SOX4Q06945 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX4Q06945 AC079097.1-201ENST00000512187 1399 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 AC090229.1-201ENST00000590983 1609 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.32□□□□□ -1.4
SOX4Q06945 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SOX4Q06945 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
SOX4Q06945 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
SOX4Q06945 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SOX4Q06945 ZNF733P-202ENST00000444809 1573 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SOX4Q06945 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SOX4Q06945 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
SOX4Q06945 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SOX4Q06945 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SOX4Q06945 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SOX4Q06945 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.32□□□□□ -1.4
SOX4Q06945 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SOX4Q06945 SNORD56.2-201ENST00000363242 71 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 RNA5SP242-201ENST00000364171 118 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SOX4Q06945 Y_RNA.409-201ENST00000383990 98 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 RNU6-483P-201ENST00000384088 108 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 MT-TP-201ENST00000387461 68 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SOX4Q06945 RPS24P12-201ENST00000402084 394 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 RPS3AP3-201ENST00000411933 242 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC6.32□□□□□ -1.4
SOX4Q06945 ZNF90P2-204ENST00000419323 1075 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC6.32□□□□□ -1.4
SOX4Q06945 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX4Q06945 AL358934.1-201ENST00000432346 324 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.32□□□□□ -1.4
SOX4Q06945 RABEPKP1-201ENST00000440529 1026 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SOX4Q06945 AC022364.2-201ENST00000457963 554 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC6.32□□□□□ -1.4
SOX4Q06945 AC026412.2-201ENST00000512270 1075 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 AC109635.6-201ENST00000525487 1113 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.32□□□□□ -1.4
SOX4Q06945 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC6.32□□□□□ -1.4
SOX4Q06945 AP002812.4-201ENST00000532139 286 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms