Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RAE1P78406 RN7SKP114-201ENST00000410327 279 ntBASIC4.83□□□□□ -1.64
RAE1P78406 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AC098592.1-201ENST00000419352 333 ntBASIC4.83□□□□□ -1.64
RAE1P78406 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.83□□□□□ -1.64
RAE1P78406 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.83□□□□□ -1.64
RAE1P78406 AL593851.1-201ENST00000426171 157 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AC234781.2-201ENST00000426370 994 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.83□□□□□ -1.64
RAE1P78406 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.83□□□□□ -1.64
RAE1P78406 RPL35AP21-201ENST00000437667 333 ntBASIC4.83□□□□□ -1.64
RAE1P78406 GSTA7P-201ENST00000438425 448 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AL354941.1-201ENST00000438600 464 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.83□□□□□ -1.64
RAE1P78406 AL450023.3-201ENST00000440592 271 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.83□□□□□ -1.64
RAE1P78406 PNPLA4P1-201ENST00000458328 305 ntBASIC4.83□□□□□ -1.64
RAE1P78406 RNU7-125P-201ENST00000458760 62 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.83□□□□□ -1.64
RAE1P78406 RPL23AP71-201ENST00000470966 469 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AC015724.1-201ENST00000478577 156 ntBASIC4.83□□□□□ -1.64
RAE1P78406 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAE1P78406 LINC00888-204ENST00000487386 421 ntBASIC4.83□□□□□ -1.64
RAE1P78406 COX6B1P2-201ENST00000489624 230 ntBASIC4.83□□□□□ -1.64
RAE1P78406 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.83□□□□□ -1.64
RAE1P78406 AC079395.1-201ENST00000510981 262 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AC109445.1-201ENST00000512356 383 ntBASIC4.83□□□□□ -1.64
RAE1P78406 RNU6-232P-201ENST00000517144 64 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AC105031.1-201ENST00000518550 476 ntBASIC4.83□□□□□ -1.64
RAE1P78406 IGKV2-36-201ENST00000519999 223 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AC087808.1-201ENST00000520501 361 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.83□□□□□ -1.64
RAE1P78406 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.83□□□□□ -1.64
RAE1P78406 AP006245.2-201ENST00000522004 300 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.83□□□□□ -1.64
RAE1P78406 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
RAE1P78406 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.83□□□□□ -1.64
RAE1P78406 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.83□□□□□ -1.64
RAE1P78406 LSM3P2-201ENST00000551246 273 ntBASIC4.83□□□□□ -1.64
RAE1P78406 OR11J2P-201ENST00000555298 907 ntBASIC4.83□□□□□ -1.64
RAE1P78406 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.83□□□□□ -1.64
RAE1P78406 AC079171.1-201ENST00000568788 914 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AC011840.5-201ENST00000582125 771 ntBASIC4.83□□□□□ -1.64
RAE1P78406 MIR4310-201ENST00000582950 57 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AC090616.2-202ENST00000584248 222 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.83□□□□□ -1.64
RAE1P78406 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.83□□□□□ -1.64
RAE1P78406 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.83□□□□□ -1.64
RAE1P78406 AC011445.2-201ENST00000599274 173 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.83□□□□□ -1.64
RAE1P78406 AC146944.4-201ENST00000602697 718 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AC095055.1-201ENST00000603472 1113 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AC009220.3-201ENST00000604318 586 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AC072039.2-201ENST00000608883 439 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AC092140.2-201ENST00000618027 521 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AP002505.2-201ENST00000623585 696 ntBASIC4.83□□□□□ -1.64
RAE1P78406 CDRT1-208ENST00000630868 794 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.83□□□□□ -1.64
RAE1P78406 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.83□□□□□ -1.64
RAE1P78406 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RAE1P78406 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.83□□□□□ -1.64
RAE1P78406 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.83□□□□□ -1.64
RAE1P78406 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAE1P78406 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RAE1P78406 ASNSP1-204ENST00000641977 1664 ntBASIC4.83□□□□□ -1.64
RAE1P78406 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.83□□□□□ -1.64
RAE1P78406 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RAE1P78406 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAE1P78406 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAE1P78406 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAE1P78406 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.82□□□□□ -1.64
RAE1P78406 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.82□□□□□ -1.64
RAE1P78406 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAE1P78406 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RAE1P78406 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.82□□□□□ -1.64
RAE1P78406 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.82□□□□□ -1.64
RAE1P78406 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.82□□□□□ -1.64
RAE1P78406 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.82□□□□□ -1.64
RAE1P78406 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAE1P78406 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RAE1P78406 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RAE1P78406 RNU6-839P-201ENST00000363347 108 ntBASIC4.82□□□□□ -1.64
RAE1P78406 RN7SKP113-201ENST00000363891 295 ntBASIC4.82□□□□□ -1.64
RAE1P78406 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.82□□□□□ -1.64
RAE1P78406 SNORA51.12-201ENST00000384448 134 ntBASIC4.82□□□□□ -1.64
RAE1P78406 AL590084.2-201ENST00000401481 382 ntBASIC4.82□□□□□ -1.64
RAE1P78406 SNORA77-201ENST00000408716 125 ntBASIC4.82□□□□□ -1.64
RAE1P78406 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.82□□□□□ -1.64
RAE1P78406 SEPT2P1-201ENST00000419651 180 ntBASIC4.82□□□□□ -1.64
RAE1P78406 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.82□□□□□ -1.64
RAE1P78406 AC004074.1-201ENST00000421810 1063 ntBASIC4.82□□□□□ -1.64
RAE1P78406 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.82□□□□□ -1.64
RAE1P78406 ATP5F1P1-201ENST00000433775 569 ntBASIC4.82□□□□□ -1.64
RAE1P78406 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.82□□□□□ -1.64
RAE1P78406 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.82□□□□□ -1.64
RAE1P78406 AL031663.1-201ENST00000437445 219 ntBASIC4.82□□□□□ -1.64
RAE1P78406 MTND2P4-201ENST00000445034 1004 ntBASIC4.82□□□□□ -1.64
RAE1P78406 MTCYBP3-201ENST00000445588 1137 ntBASIC4.82□□□□□ -1.64
RAE1P78406 AC004980.3-201ENST00000447046 365 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms