Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 OR11H5P-202ENST00000641612 1325 ntBASIC4.57□□□□□ -1.68
TPM4P67936 AC009313.2-201ENST00000417893 1941 ntBASIC4.57□□□□□ -1.68
TPM4P67936 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.57□□□□□ -1.68
TPM4P67936 SNORA51.1-201ENST00000363243 140 ntBASIC4.57□□□□□ -1.68
TPM4P67936 RNA5SP87-201ENST00000384155 118 ntBASIC4.57□□□□□ -1.68
TPM4P67936 AL645927.1-201ENST00000396783 406 ntBASIC4.57□□□□□ -1.68
TPM4P67936 AL583835.1-201ENST00000399570 407 ntBASIC4.57□□□□□ -1.68
TPM4P67936 RN7SKP235-201ENST00000410662 305 ntBASIC4.57□□□□□ -1.68
TPM4P67936 RPL6P29-201ENST00000414863 865 ntBASIC4.57□□□□□ -1.68
TPM4P67936 AC096644.3-201ENST00000416788 338 ntBASIC4.57□□□□□ -1.68
TPM4P67936 MFSD13B-201ENST00000420133 1290 ntBASIC4.57□□□□□ -1.68
TPM4P67936 VN1R54P-201ENST00000435210 1049 ntBASIC4.57□□□□□ -1.68
TPM4P67936 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.57□□□□□ -1.68
TPM4P67936 SERPINA7P1-201ENST00000443077 631 ntBASIC4.57□□□□□ -1.68
TPM4P67936 RPL36AP15-201ENST00000444514 266 ntBASIC4.57□□□□□ -1.68
TPM4P67936 STRADBP1-201ENST00000478954 1281 ntBASIC4.57□□□□□ -1.68
TPM4P67936 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.57□□□□□ -1.68
TPM4P67936 OR5M14P-201ENST00000506803 618 ntBASIC4.57□□□□□ -1.68
TPM4P67936 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TPM4P67936 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.57□□□□□ -1.68
TPM4P67936 RNU7-143P-201ENST00000516781 65 ntBASIC4.57□□□□□ -1.68
TPM4P67936 AC109635.6-201ENST00000525487 1113 ntBASIC4.57□□□□□ -1.68
TPM4P67936 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.57□□□□□ -1.68
TPM4P67936 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.57□□□□□ -1.68
TPM4P67936 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.57□□□□□ -1.68
TPM4P67936 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.57□□□□□ -1.68
TPM4P67936 AC116447.1-201ENST00000613153 453 ntBASIC4.57□□□□□ -1.68
TPM4P67936 AL445363.3-201ENST00000623080 671 ntBASIC4.57□□□□□ -1.68
TPM4P67936 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.57□□□□□ -1.68
TPM4P67936 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.57□□□□□ -1.68
TPM4P67936 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TPM4P67936 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.57□□□□□ -1.68
TPM4P67936 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TPM4P67936 AL049555.1-201ENST00000562834 1933 ntBASIC4.56□□□□□ -1.68
TPM4P67936 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TPM4P67936 CR788268.1-201ENST00000603931 1809 ntBASIC4.56□□□□□ -1.68
TPM4P67936 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
TPM4P67936 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.56□□□□□ -1.68
TPM4P67936 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
TPM4P67936 SNORD35B-201ENST00000363660 87 ntBASIC4.56□□□□□ -1.68
TPM4P67936 SPTLC1P2-201ENST00000407089 121 ntBASIC4.56□□□□□ -1.68
TPM4P67936 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TPM4P67936 RNU6-603P-201ENST00000411403 107 ntBASIC4.56□□□□□ -1.68
TPM4P67936 AC115285.1-201ENST00000424879 736 ntBASIC4.56□□□□□ -1.68
TPM4P67936 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.56□□□□□ -1.68
TPM4P67936 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.56□□□□□ -1.68
TPM4P67936 AL354710.1-201ENST00000453641 246 ntBASIC4.56□□□□□ -1.68
TPM4P67936 AC109327.1-201ENST00000471666 403 ntBASIC4.56□□□□□ -1.68
TPM4P67936 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.56□□□□□ -1.68
TPM4P67936 PRELID3BP7-201ENST00000503606 469 ntBASIC4.56□□□□□ -1.68
TPM4P67936 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.56□□□□□ -1.68
TPM4P67936 KCTD9P2-201ENST00000512203 1013 ntBASIC4.56□□□□□ -1.68
TPM4P67936 AC026726.1-201ENST00000512859 601 ntBASIC4.56□□□□□ -1.68
TPM4P67936 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.56□□□□□ -1.68
TPM4P67936 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TPM4P67936 DEFB109D-201ENST00000529497 240 ntBASIC4.56□□□□□ -1.68
TPM4P67936 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.56□□□□□ -1.68
TPM4P67936 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TPM4P67936 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TPM4P67936 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
TPM4P67936 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.56□□□□□ -1.68
TPM4P67936 HNRNPCP4-201ENST00000571636 900 ntBASIC4.56□□□□□ -1.68
TPM4P67936 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.56□□□□□ -1.68
TPM4P67936 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.56□□□□□ -1.68
TPM4P67936 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.56□□□□□ -1.68
TPM4P67936 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.56□□□□□ -1.68
TPM4P67936 AC016769.4-201ENST00000616893 535 ntBASIC4.56□□□□□ -1.68
TPM4P67936 AL445528.2-201ENST00000620582 470 ntBASIC4.56□□□□□ -1.68
TPM4P67936 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.56□□□□□ -1.68
TPM4P67936 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.56□□□□□ -1.68
TPM4P67936 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.56□□□□□ -1.68
TPM4P67936 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TPM4P67936 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TPM4P67936 NCAPGP1-201ENST00000505112 1814 ntBASIC4.56□□□□□ -1.68
TPM4P67936 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
TPM4P67936 DHX40P1-201ENST00000588725 1412 ntBASIC4.55□□□□□ -1.68
TPM4P67936 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TPM4P67936 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TPM4P67936 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.55□□□□□ -1.68
TPM4P67936 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.55□□□□□ -1.68
TPM4P67936 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.55□□□□□ -1.68
TPM4P67936 RNU4-7P-201ENST00000364758 141 ntBASIC4.55□□□□□ -1.68
TPM4P67936 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
TPM4P67936 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.55□□□□□ -1.68
TPM4P67936 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TPM4P67936 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.55□□□□□ -1.68
TPM4P67936 AC019050.1-201ENST00000418508 492 ntBASIC4.55□□□□□ -1.68
TPM4P67936 RPL12P34-201ENST00000424532 479 ntBASIC4.55□□□□□ -1.68
TPM4P67936 FTH1P16-201ENST00000435241 552 ntBASIC4.55□□□□□ -1.68
TPM4P67936 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.55□□□□□ -1.68
TPM4P67936 RN7SL98P-201ENST00000462271 300 ntBASIC4.55□□□□□ -1.68
TPM4P67936 RN7SL354P-201ENST00000469282 294 ntBASIC4.55□□□□□ -1.68
TPM4P67936 AF213884.1-201ENST00000488102 463 ntBASIC4.55□□□□□ -1.68
TPM4P67936 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.55□□□□□ -1.68
TPM4P67936 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TPM4P67936 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.55□□□□□ -1.68
TPM4P67936 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TPM4P67936 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.55□□□□□ -1.68
TPM4P67936 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.55□□□□□ -1.68
TPM4P67936 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms