Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 AP004247.1-201ENST00000531556 1289 ntBASIC6.22□□□□□ -1.41
RTP1P59025 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC6.22□□□□□ -1.41
RTP1P59025 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.22□□□□□ -1.41
RTP1P59025 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.22□□□□□ -1.41
RTP1P59025 AC044913.1-201ENST00000557200 430 ntBASIC6.22□□□□□ -1.41
RTP1P59025 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.22□□□□□ -1.41
RTP1P59025 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC6.22□□□□□ -1.41
RTP1P59025 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.22□□□□□ -1.41
RTP1P59025 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.22□□□□□ -1.41
RTP1P59025 AC068020.1-201ENST00000594215 661 ntBASIC6.22□□□□□ -1.41
RTP1P59025 AC130352.1-201ENST00000602979 661 ntBASIC6.22□□□□□ -1.41
RTP1P59025 AC103881.1-201ENST00000603476 538 ntBASIC6.22□□□□□ -1.41
RTP1P59025 ELOCP34-201ENST00000604436 327 ntBASIC6.22□□□□□ -1.41
RTP1P59025 AP000238.1-201ENST00000608759 426 ntBASIC6.22□□□□□ -1.41
RTP1P59025 AC099676.1-201ENST00000608886 657 ntBASIC6.22□□□□□ -1.41
RTP1P59025 AC116618.1-201ENST00000634617 774 ntBASIC6.22□□□□□ -1.41
RTP1P59025 LINC01739-205ENST00000641890 573 ntBASIC6.22□□□□□ -1.41
RTP1P59025 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RTP1P59025 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.22□□□□□ -1.41
RTP1P59025 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.22□□□□□ -1.41
RTP1P59025 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC6.22□□□□□ -1.41
RTP1P59025 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
RTP1P59025 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RTP1P59025 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.21□□□□□ -1.41
RTP1P59025 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
RTP1P59025 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
RTP1P59025 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.21□□□□□ -1.41
RTP1P59025 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
RTP1P59025 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
RTP1P59025 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
RTP1P59025 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.21□□□□□ -1.42
RTP1P59025 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.21□□□□□ -1.42
RTP1P59025 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
RTP1P59025 SNORA67-201ENST00000384423 137 ntBASIC6.21□□□□□ -1.42
RTP1P59025 RNU6-253P-201ENST00000384730 105 ntBASIC6.21□□□□□ -1.42
RTP1P59025 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.21□□□□□ -1.42
RTP1P59025 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RTP1P59025 HMGB3P18-201ENST00000406327 590 ntBASIC6.21□□□□□ -1.42
RTP1P59025 DUTP5-201ENST00000406790 469 ntBASIC6.21□□□□□ -1.42
RTP1P59025 AC004448.2-201ENST00000422360 586 ntBASIC6.21□□□□□ -1.42
RTP1P59025 AC006065.1-201ENST00000422539 802 ntBASIC6.21□□□□□ -1.42
RTP1P59025 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.21□□□□□ -1.42
RTP1P59025 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.21□□□□□ -1.42
RTP1P59025 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.21□□□□□ -1.42
RTP1P59025 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
RTP1P59025 MYL12BP2-201ENST00000503948 512 ntBASIC6.21□□□□□ -1.42
RTP1P59025 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC6.21□□□□□ -1.42
RTP1P59025 AL671862.1-201ENST00000515851 349 ntBASIC6.21□□□□□ -1.42
RTP1P59025 RNU6-528P-201ENST00000516926 100 ntBASIC6.21□□□□□ -1.42
RTP1P59025 AC025881.1-201ENST00000518851 512 ntBASIC6.21□□□□□ -1.42
RTP1P59025 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC6.21□□□□□ -1.42
RTP1P59025 NPM1P6-201ENST00000521088 871 ntBASIC6.21□□□□□ -1.42
RTP1P59025 OR5D2P-201ENST00000524390 911 ntBASIC6.21□□□□□ -1.42
RTP1P59025 MED28P5-201ENST00000528254 438 ntBASIC6.21□□□□□ -1.42
RTP1P59025 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.21□□□□□ -1.42
RTP1P59025 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC6.21□□□□□ -1.42
RTP1P59025 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC6.21□□□□□ -1.42
RTP1P59025 ATP5F1P7-201ENST00000567330 760 ntBASIC6.21□□□□□ -1.42
RTP1P59025 AC004067.1-201ENST00000608733 700 ntBASIC6.21□□□□□ -1.42
RTP1P59025 TUG1_1.1-201ENST00000610654 145 ntBASIC6.21□□□□□ -1.42
RTP1P59025 AC011815.3-201ENST00000624194 473 ntBASIC6.21□□□□□ -1.42
RTP1P59025 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.21□□□□□ -1.42
RTP1P59025 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.21□□□□□ -1.42
RTP1P59025 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
RTP1P59025 PWAR1-201ENST00000624188 2414 ntBASIC6.21□□□□□ -1.42
RTP1P59025 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
RTP1P59025 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
RTP1P59025 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RTP1P59025 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
RTP1P59025 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RTP1P59025 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RTP1P59025 AC093671.1-201ENST00000624981 2929 ntBASIC6.21□□□□□ -1.42
RTP1P59025 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
RTP1P59025 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
RTP1P59025 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.21□□□□□ -1.42
RTP1P59025 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.21□□□□□ -1.42
RTP1P59025 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RTP1P59025 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
RTP1P59025 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RTP1P59025 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RTP1P59025 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RTP1P59025 CDY11P-201ENST00000447168 1651 ntBASIC6.2□□□□□ -1.42
RTP1P59025 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RTP1P59025 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RTP1P59025 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RTP1P59025 CASC19-260ENST00000641828 2001 ntBASIC6.2□□□□□ -1.42
RTP1P59025 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.2□□□□□ -1.42
RTP1P59025 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.2□□□□□ -1.42
RTP1P59025 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RTP1P59025 RNY4P24-201ENST00000362735 96 ntBASIC6.2□□□□□ -1.42
RTP1P59025 CYB5AP4-201ENST00000396692 399 ntBASIC6.2□□□□□ -1.42
RTP1P59025 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RTP1P59025 MTCO3P31-201ENST00000405526 789 ntBASIC6.2□□□□□ -1.42
RTP1P59025 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.2□□□□□ -1.42
RTP1P59025 RNA5SP80-201ENST00000410475 111 ntBASIC6.2□□□□□ -1.42
RTP1P59025 AC007435.1-201ENST00000421086 415 ntBASIC6.2□□□□□ -1.42
RTP1P59025 OR10T1P-201ENST00000424327 947 ntBASIC6.2□□□□□ -1.42
RTP1P59025 DSTNP5-201ENST00000427921 523 ntBASIC6.2□□□□□ -1.42
RTP1P59025 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC6.2□□□□□ -1.42
RTP1P59025 USP9YP31-201ENST00000431405 881 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms