Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VSX2P58304 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.09□□□□□ -1.75
VSX2P58304 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.09□□□□□ -1.75
VSX2P58304 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.09□□□□□ -1.75
VSX2P58304 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.09□□□□□ -1.75
VSX2P58304 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.09□□□□□ -1.75
VSX2P58304 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.09□□□□□ -1.75
VSX2P58304 FCF1P7-201ENST00000451185 558 ntBASIC4.09□□□□□ -1.75
VSX2P58304 AC009963.2-201ENST00000453431 138 ntBASIC4.09□□□□□ -1.75
VSX2P58304 RPS20P4-201ENST00000461659 355 ntBASIC4.09□□□□□ -1.75
VSX2P58304 PPIAP21-201ENST00000464473 501 ntBASIC4.09□□□□□ -1.75
VSX2P58304 RPS26P28-201ENST00000470806 348 ntBASIC4.09□□□□□ -1.75
VSX2P58304 AC037198.2-201ENST00000478845 733 ntBASIC4.09□□□□□ -1.75
VSX2P58304 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VSX2P58304 AC008676.3-201ENST00000521237 435 ntBASIC4.09□□□□□ -1.75
VSX2P58304 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.09□□□□□ -1.75
VSX2P58304 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.09□□□□□ -1.75
VSX2P58304 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
VSX2P58304 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.09□□□□□ -1.75
VSX2P58304 SNORD39.2-201ENST00000579995 76 ntBASIC4.09□□□□□ -1.75
VSX2P58304 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.09□□□□□ -1.75
VSX2P58304 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.09□□□□□ -1.75
VSX2P58304 AC023813.4-201ENST00000607580 580 ntBASIC4.09□□□□□ -1.75
VSX2P58304 AC117490.2-201ENST00000610042 594 ntBASIC4.09□□□□□ -1.75
VSX2P58304 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.09□□□□□ -1.75
VSX2P58304 AL445567.2-201ENST00000618935 498 ntBASIC4.09□□□□□ -1.75
VSX2P58304 AC015722.2-201ENST00000622210 551 ntBASIC4.09□□□□□ -1.75
VSX2P58304 AC067931.1-201ENST00000624190 671 ntBASIC4.09□□□□□ -1.75
VSX2P58304 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.09□□□□□ -1.75
VSX2P58304 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
VSX2P58304 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
VSX2P58304 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.09□□□□□ -1.75
VSX2P58304 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.09□□□□□ -1.75
VSX2P58304 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
VSX2P58304 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
VSX2P58304 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
VSX2P58304 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.08□□□□□ -1.76
VSX2P58304 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
VSX2P58304 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VSX2P58304 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.08□□□□□ -1.76
VSX2P58304 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
VSX2P58304 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
VSX2P58304 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.08□□□□□ -1.76
VSX2P58304 SNORD66.1-201ENST00000391230 76 ntBASIC4.08□□□□□ -1.76
VSX2P58304 AL161909.1-201ENST00000397390 712 ntBASIC4.08□□□□□ -1.76
VSX2P58304 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.08□□□□□ -1.76
VSX2P58304 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
VSX2P58304 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VSX2P58304 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.08□□□□□ -1.76
VSX2P58304 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.08□□□□□ -1.76
VSX2P58304 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.08□□□□□ -1.76
VSX2P58304 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.08□□□□□ -1.76
VSX2P58304 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
VSX2P58304 RN7SL691P-201ENST00000494487 301 ntBASIC4.08□□□□□ -1.76
VSX2P58304 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.08□□□□□ -1.76
VSX2P58304 KCTD9P2-201ENST00000512203 1013 ntBASIC4.08□□□□□ -1.76
VSX2P58304 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.08□□□□□ -1.76
VSX2P58304 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VSX2P58304 MRPL49P2-201ENST00000521066 465 ntBASIC4.08□□□□□ -1.76
VSX2P58304 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.08□□□□□ -1.76
VSX2P58304 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.08□□□□□ -1.76
VSX2P58304 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.08□□□□□ -1.76
VSX2P58304 SS18L2P2-201ENST00000583960 235 ntBASIC4.08□□□□□ -1.76
VSX2P58304 AC008759.1-201ENST00000589783 983 ntBASIC4.08□□□□□ -1.76
VSX2P58304 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
VSX2P58304 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.08□□□□□ -1.76
VSX2P58304 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.08□□□□□ -1.76
VSX2P58304 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.08□□□□□ -1.76
VSX2P58304 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.08□□□□□ -1.76
VSX2P58304 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
VSX2P58304 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VSX2P58304 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
VSX2P58304 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.08□□□□□ -1.76
VSX2P58304 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.07□□□□□ -1.76
VSX2P58304 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
VSX2P58304 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VSX2P58304 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.07□□□□□ -1.76
VSX2P58304 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VSX2P58304 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
VSX2P58304 ST13P16-201ENST00000401760 781 ntBASIC4.07□□□□□ -1.76
VSX2P58304 AMZ2P2-201ENST00000406819 1057 ntBASIC4.07□□□□□ -1.76
VSX2P58304 GSTM3P2-201ENST00000412746 530 ntBASIC4.07□□□□□ -1.76
VSX2P58304 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.07□□□□□ -1.76
VSX2P58304 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.07□□□□□ -1.76
VSX2P58304 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VSX2P58304 AC004552.1-201ENST00000419089 348 ntBASIC4.07□□□□□ -1.76
VSX2P58304 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.07□□□□□ -1.76
VSX2P58304 AC007064.3-201ENST00000422608 359 ntBASIC4.07□□□□□ -1.76
VSX2P58304 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.07□□□□□ -1.76
VSX2P58304 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.07□□□□□ -1.76
VSX2P58304 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.07□□□□□ -1.76
VSX2P58304 EEF1A1P1-201ENST00000447052 739 ntBASIC4.07□□□□□ -1.76
VSX2P58304 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.07□□□□□ -1.76
VSX2P58304 RPL23AP81-201ENST00000455252 467 ntBASIC4.07□□□□□ -1.76
VSX2P58304 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.07□□□□□ -1.76
VSX2P58304 CCDC75P1-201ENST00000469247 791 ntBASIC4.07□□□□□ -1.76
VSX2P58304 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.07□□□□□ -1.76
VSX2P58304 RPS26P3-201ENST00000470205 348 ntBASIC4.07□□□□□ -1.76
VSX2P58304 AC090543.2-201ENST00000483963 348 ntBASIC4.07□□□□□ -1.76
VSX2P58304 AC004057.1-201ENST00000485827 348 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms