Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.39□□□□□ -1.71
CDH6P55285 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CDH6P55285 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDH6P55285 RNA5SP52-201ENST00000362448 134 ntBASIC4.39□□□□□ -1.71
CDH6P55285 RNU4-39P-201ENST00000362455 127 ntBASIC4.39□□□□□ -1.71
CDH6P55285 RNU1-14P-201ENST00000362759 152 ntBASIC4.39□□□□□ -1.71
CDH6P55285 RNU1-32P-201ENST00000363937 159 ntBASIC4.39□□□□□ -1.71
CDH6P55285 RNA5SP509-201ENST00000364577 119 ntBASIC4.39□□□□□ -1.71
CDH6P55285 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDH6P55285 AL607077.1-201ENST00000401718 499 ntBASIC4.39□□□□□ -1.71
CDH6P55285 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDH6P55285 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDH6P55285 P2RY10P2-201ENST00000416730 913 ntBASIC4.39□□□□□ -1.71
CDH6P55285 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDH6P55285 AL732292.1-201ENST00000426692 226 ntBASIC4.39□□□□□ -1.71
CDH6P55285 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.39□□□□□ -1.71
CDH6P55285 RPL23AP89-201ENST00000439324 255 ntBASIC4.39□□□□□ -1.71
CDH6P55285 CBX1P1-201ENST00000440184 427 ntBASIC4.39□□□□□ -1.71
CDH6P55285 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDH6P55285 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.39□□□□□ -1.71
CDH6P55285 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.39□□□□□ -1.71
CDH6P55285 TPT1P13-201ENST00000449760 499 ntBASIC4.39□□□□□ -1.71
CDH6P55285 RPL7AP52-201ENST00000458096 790 ntBASIC4.39□□□□□ -1.71
CDH6P55285 AC011276.1-201ENST00000469688 323 ntBASIC4.39□□□□□ -1.71
CDH6P55285 RPL35P6-201ENST00000490024 372 ntBASIC4.39□□□□□ -1.71
CDH6P55285 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.39□□□□□ -1.71
CDH6P55285 PPM1AP1-201ENST00000502740 1135 ntBASIC4.39□□□□□ -1.71
CDH6P55285 BNIP3P41-201ENST00000503774 571 ntBASIC4.39□□□□□ -1.71
CDH6P55285 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.39□□□□□ -1.71
CDH6P55285 AC147055.1-201ENST00000509261 750 ntBASIC4.39□□□□□ -1.71
CDH6P55285 AC093840.1-201ENST00000511599 336 ntBASIC4.39□□□□□ -1.71
CDH6P55285 RNA5SP49-201ENST00000516450 115 ntBASIC4.39□□□□□ -1.71
CDH6P55285 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.39□□□□□ -1.71
CDH6P55285 AC009643.1-201ENST00000532030 391 ntBASIC4.39□□□□□ -1.71
CDH6P55285 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.39□□□□□ -1.71
CDH6P55285 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.39□□□□□ -1.71
CDH6P55285 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.39□□□□□ -1.71
CDH6P55285 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.39□□□□□ -1.71
CDH6P55285 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDH6P55285 AL121873.1-201ENST00000616013 524 ntBASIC4.39□□□□□ -1.71
CDH6P55285 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.39□□□□□ -1.71
CDH6P55285 AL139254.3-201ENST00000641097 674 ntBASIC4.39□□□□□ -1.71
CDH6P55285 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.39□□□□□ -1.71
CDH6P55285 NOL8P1-201ENST00000508336 3529 ntBASIC4.39□□□□□ -1.71
CDH6P55285 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.39□□□□□ -1.71
CDH6P55285 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
CDH6P55285 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CDH6P55285 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDH6P55285 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH6P55285 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDH6P55285 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDH6P55285 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH6P55285 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CDH6P55285 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CDH6P55285 U3.22-201ENST00000391120 215 ntBASIC4.38□□□□□ -1.71
CDH6P55285 RPL23AP48-201ENST00000406913 488 ntBASIC4.38□□□□□ -1.71
CDH6P55285 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH6P55285 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH6P55285 AC011933.1-201ENST00000413334 321 ntBASIC4.38□□□□□ -1.71
CDH6P55285 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.38□□□□□ -1.71
CDH6P55285 RPA2P2-201ENST00000419698 796 ntBASIC4.38□□□□□ -1.71
CDH6P55285 AJ239321.1-201ENST00000424255 564 ntBASIC4.38□□□□□ -1.71
CDH6P55285 MTCO1P45-201ENST00000431457 267 ntBASIC4.38□□□□□ -1.71
CDH6P55285 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH6P55285 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH6P55285 EIF2S2P2-201ENST00000447161 982 ntBASIC4.38□□□□□ -1.71
CDH6P55285 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH6P55285 AC116533.1-201ENST00000459748 321 ntBASIC4.38□□□□□ -1.71
CDH6P55285 RPL7AP28-201ENST00000464513 571 ntBASIC4.38□□□□□ -1.71
CDH6P55285 AC006463.2-201ENST00000473326 348 ntBASIC4.38□□□□□ -1.71
CDH6P55285 RN7SL691P-201ENST00000494487 301 ntBASIC4.38□□□□□ -1.71
CDH6P55285 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH6P55285 PARP4P3-201ENST00000510265 317 ntBASIC4.38□□□□□ -1.71
CDH6P55285 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH6P55285 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.38□□□□□ -1.71
CDH6P55285 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH6P55285 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH6P55285 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH6P55285 AC068714.1-201ENST00000559623 800 ntBASIC4.38□□□□□ -1.71
CDH6P55285 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH6P55285 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.38□□□□□ -1.71
CDH6P55285 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH6P55285 MIR4277-201ENST00000578298 84 ntBASIC4.38□□□□□ -1.71
CDH6P55285 AC009303.3-201ENST00000591103 736 ntBASIC4.38□□□□□ -1.71
CDH6P55285 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.38□□□□□ -1.71
CDH6P55285 RPL26P30-202ENST00000602923 645 ntBASIC4.38□□□□□ -1.71
CDH6P55285 MTCO2P22-201ENST00000603246 681 ntBASIC4.38□□□□□ -1.71
CDH6P55285 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH6P55285 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH6P55285 AC064801.1-201ENST00000612025 407 ntBASIC4.38□□□□□ -1.71
CDH6P55285 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDH6P55285 AC116447.1-201ENST00000613153 453 ntBASIC4.38□□□□□ -1.71
CDH6P55285 AC107905.1-201ENST00000616204 426 ntBASIC4.38□□□□□ -1.71
CDH6P55285 AC079298.2-201ENST00000623885 459 ntBASIC4.38□□□□□ -1.71
CDH6P55285 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH6P55285 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CDH6P55285 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDH6P55285 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH6P55285 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDH6P55285 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms