Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.9□□□□□ -1.46
EPHB3P54753 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
EPHB3P54753 RPL23AP17-201ENST00000401064 499 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 RPL10P10-201ENST00000403509 664 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 RNA5SP80-201ENST00000410475 111 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.9□□□□□ -1.46
EPHB3P54753 MTCYBP24-201ENST00000420387 1106 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.9□□□□□ -1.46
EPHB3P54753 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.9□□□□□ -1.46
EPHB3P54753 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.9□□□□□ -1.46
EPHB3P54753 AL035458.1-201ENST00000433096 585 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 MTND1P28-201ENST00000435623 950 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 RPS3AP38-201ENST00000435889 763 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.9□□□□□ -1.46
EPHB3P54753 CYCSP12-201ENST00000437729 300 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 AL353898.1-201ENST00000444055 238 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 MTCO2P25-201ENST00000447065 681 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 NFU1P2-201ENST00000448700 469 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 AL591363.1-201ENST00000450091 483 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.9□□□□□ -1.46
EPHB3P54753 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.9□□□□□ -1.46
EPHB3P54753 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC5.9□□□□□ -1.46
EPHB3P54753 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 SLC25A51P1-201ENST00000468432 871 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.9□□□□□ -1.46
EPHB3P54753 UBTFL6-201ENST00000477929 1024 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
EPHB3P54753 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.9□□□□□ -1.46
EPHB3P54753 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.9□□□□□ -1.46
EPHB3P54753 RPL9P6-201ENST00000492764 598 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.9□□□□□ -1.46
EPHB3P54753 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.9□□□□□ -1.46
EPHB3P54753 AC023632.1-201ENST00000518463 375 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.9□□□□□ -1.46
EPHB3P54753 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.9□□□□□ -1.46
EPHB3P54753 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.9□□□□□ -1.46
EPHB3P54753 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.9□□□□□ -1.46
EPHB3P54753 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.9□□□□□ -1.46
EPHB3P54753 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC5.9□□□□□ -1.46
EPHB3P54753 AC124947.2-202ENST00000552735 133 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 MIR4528-201ENST00000577763 90 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.9□□□□□ -1.46
EPHB3P54753 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.9□□□□□ -1.46
EPHB3P54753 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.9□□□□□ -1.46
EPHB3P54753 AL365503.1-201ENST00000605247 905 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
EPHB3P54753 MIR6719-201ENST00000622428 87 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 AC087821.2-201ENST00000637086 450 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.9□□□□□ -1.46
EPHB3P54753 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.9□□□□□ -1.46
EPHB3P54753 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.9□□□□□ -1.47
EPHB3P54753 AC235565.1-201ENST00000456962 1325 ntBASIC5.9□□□□□ -1.47
EPHB3P54753 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
EPHB3P54753 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
EPHB3P54753 AC138393.1-206ENST00000540997 1886 ntBASIC5.9□□□□□ -1.47
EPHB3P54753 AC131971.1-201ENST00000332881 1482 ntBASIC5.9□□□□□ -1.47
EPHB3P54753 TEX21P-201ENST00000447107 1476 ntBASIC5.9□□□□□ -1.47
EPHB3P54753 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
EPHB3P54753 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
EPHB3P54753 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.89□□□□□ -1.47
EPHB3P54753 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
EPHB3P54753 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
EPHB3P54753 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
EPHB3P54753 AC025470.1-201ENST00000510053 2032 ntBASIC5.89□□□□□ -1.47
EPHB3P54753 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
EPHB3P54753 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.89□□□□□ -1.47
EPHB3P54753 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
EPHB3P54753 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
EPHB3P54753 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
EPHB3P54753 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
EPHB3P54753 OR9G4-201ENST00000302957 984 ntBASIC5.89□□□□□ -1.47
EPHB3P54753 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.89□□□□□ -1.47
EPHB3P54753 RNU6-171P-201ENST00000384354 107 ntBASIC5.89□□□□□ -1.47
EPHB3P54753 Y_RNA.535-201ENST00000384612 99 ntBASIC5.89□□□□□ -1.47
EPHB3P54753 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
EPHB3P54753 RPL11P3-201ENST00000395256 523 ntBASIC5.89□□□□□ -1.47
EPHB3P54753 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.89□□□□□ -1.47
EPHB3P54753 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.89□□□□□ -1.47
EPHB3P54753 AC007435.1-201ENST00000421086 415 ntBASIC5.89□□□□□ -1.47
EPHB3P54753 AL139413.1-201ENST00000421309 217 ntBASIC5.89□□□□□ -1.47
EPHB3P54753 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.89□□□□□ -1.47
EPHB3P54753 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.89□□□□□ -1.47
EPHB3P54753 AL136231.1-201ENST00000429407 730 ntBASIC5.89□□□□□ -1.47
EPHB3P54753 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.89□□□□□ -1.47
EPHB3P54753 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.89□□□□□ -1.47
EPHB3P54753 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
EPHB3P54753 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.89□□□□□ -1.47
EPHB3P54753 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
EPHB3P54753 AC098824.1-201ENST00000453565 980 ntBASIC5.89□□□□□ -1.47
EPHB3P54753 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.89□□□□□ -1.47
EPHB3P54753 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.89□□□□□ -1.47
EPHB3P54753 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.89□□□□□ -1.47
EPHB3P54753 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.89□□□□□ -1.47
EPHB3P54753 AC008628.2-201ENST00000502605 298 ntBASIC5.89□□□□□ -1.47
EPHB3P54753 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
EPHB3P54753 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.89□□□□□ -1.47
EPHB3P54753 RNU6-875P-201ENST00000516488 106 ntBASIC5.89□□□□□ -1.47
EPHB3P54753 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.89□□□□□ -1.47
EPHB3P54753 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms