Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.37□□□□□ -1.55
NEK3P51956 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.37□□□□□ -1.55
NEK3P51956 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.37□□□□□ -1.55
NEK3P51956 RPS18P6-201ENST00000476880 458 ntBASIC5.37□□□□□ -1.55
NEK3P51956 RN7SL814P-201ENST00000487715 300 ntBASIC5.37□□□□□ -1.55
NEK3P51956 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.37□□□□□ -1.55
NEK3P51956 AC114322.1-201ENST00000506771 926 ntBASIC5.37□□□□□ -1.55
NEK3P51956 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.37□□□□□ -1.55
NEK3P51956 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.37□□□□□ -1.55
NEK3P51956 RNU6-202P-201ENST00000515998 96 ntBASIC5.37□□□□□ -1.55
NEK3P51956 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
NEK3P51956 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.37□□□□□ -1.55
NEK3P51956 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.37□□□□□ -1.55
NEK3P51956 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.37□□□□□ -1.55
NEK3P51956 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NEK3P51956 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.37□□□□□ -1.55
NEK3P51956 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.37□□□□□ -1.55
NEK3P51956 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.37□□□□□ -1.55
NEK3P51956 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.37□□□□□ -1.55
NEK3P51956 AC023050.2-201ENST00000544968 387 ntBASIC5.37□□□□□ -1.55
NEK3P51956 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.37□□□□□ -1.55
NEK3P51956 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.37□□□□□ -1.55
NEK3P51956 MTCYBP27-201ENST00000555160 670 ntBASIC5.37□□□□□ -1.55
NEK3P51956 MTND4P33-201ENST00000556706 766 ntBASIC5.37□□□□□ -1.55
NEK3P51956 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.37□□□□□ -1.55
NEK3P51956 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.37□□□□□ -1.55
NEK3P51956 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.37□□□□□ -1.55
NEK3P51956 AC093519.1-201ENST00000566109 298 ntBASIC5.37□□□□□ -1.55
NEK3P51956 MIR4443-201ENST00000585052 53 ntBASIC5.37□□□□□ -1.55
NEK3P51956 AC022022.2-201ENST00000602989 360 ntBASIC5.37□□□□□ -1.55
NEK3P51956 AC005252.1-201ENST00000604518 1063 ntBASIC5.37□□□□□ -1.55
NEK3P51956 AL354760.1-201ENST00000608357 643 ntBASIC5.37□□□□□ -1.55
NEK3P51956 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.37□□□□□ -1.55
NEK3P51956 AL139407.1-201ENST00000613826 1175 ntBASIC5.37□□□□□ -1.55
NEK3P51956 RPSAP73-201ENST00000614820 330 ntBASIC5.37□□□□□ -1.55
NEK3P51956 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NEK3P51956 AP003400.3-201ENST00000624904 346 ntBASIC5.37□□□□□ -1.55
NEK3P51956 AC073869.10-201ENST00000642016 354 ntBASIC5.37□□□□□ -1.55
NEK3P51956 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.37□□□□□ -1.55
NEK3P51956 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NEK3P51956 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NEK3P51956 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NEK3P51956 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
NEK3P51956 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
NEK3P51956 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
NEK3P51956 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
NEK3P51956 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
NEK3P51956 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NEK3P51956 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
NEK3P51956 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
NEK3P51956 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.36□□□□□ -1.55
NEK3P51956 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.36□□□□□ -1.55
NEK3P51956 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NEK3P51956 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NEK3P51956 SAGE4P-201ENST00000442271 3381 ntBASIC5.36□□□□□ -1.55
NEK3P51956 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NEK3P51956 RPL23P2-201ENST00000320371 421 ntBASIC5.36□□□□□ -1.55
NEK3P51956 RNU6-1066P-201ENST00000363573 105 ntBASIC5.36□□□□□ -1.55
NEK3P51956 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.36□□□□□ -1.55
NEK3P51956 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
NEK3P51956 DUTP5-201ENST00000406790 469 ntBASIC5.36□□□□□ -1.55
NEK3P51956 HIGD1AP15-201ENST00000416198 280 ntBASIC5.36□□□□□ -1.55
NEK3P51956 XKRYP1-201ENST00000423438 492 ntBASIC5.36□□□□□ -1.55
NEK3P51956 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.36□□□□□ -1.55
NEK3P51956 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.36□□□□□ -1.55
NEK3P51956 AC005033.1-201ENST00000428904 813 ntBASIC5.36□□□□□ -1.55
NEK3P51956 UBE2V1P1-201ENST00000430836 445 ntBASIC5.36□□□□□ -1.55
NEK3P51956 XKRYP2-201ENST00000432915 492 ntBASIC5.36□□□□□ -1.55
NEK3P51956 AC010881.1-201ENST00000433830 235 ntBASIC5.36□□□□□ -1.55
NEK3P51956 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.36□□□□□ -1.55
NEK3P51956 AL389915.2-201ENST00000454576 441 ntBASIC5.36□□□□□ -1.55
NEK3P51956 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.36□□□□□ -1.55
NEK3P51956 NF1P3-201ENST00000457709 450 ntBASIC5.36□□□□□ -1.55
NEK3P51956 AC011037.1-201ENST00000483964 558 ntBASIC5.36□□□□□ -1.55
NEK3P51956 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.36□□□□□ -1.55
NEK3P51956 MTCO3P35-201ENST00000485582 781 ntBASIC5.36□□□□□ -1.55
NEK3P51956 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.36□□□□□ -1.55
NEK3P51956 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.36□□□□□ -1.55
NEK3P51956 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.36□□□□□ -1.55
NEK3P51956 NIFKP7-201ENST00000503365 834 ntBASIC5.36□□□□□ -1.55
NEK3P51956 RPS4XP20-201ENST00000505751 772 ntBASIC5.36□□□□□ -1.55
NEK3P51956 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.36□□□□□ -1.55
NEK3P51956 MTCYBP16-201ENST00000509187 1129 ntBASIC5.36□□□□□ -1.55
NEK3P51956 AC109471.1-201ENST00000511631 612 ntBASIC5.36□□□□□ -1.55
NEK3P51956 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.36□□□□□ -1.55
NEK3P51956 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.36□□□□□ -1.55
NEK3P51956 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.36□□□□□ -1.55
NEK3P51956 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.36□□□□□ -1.55
NEK3P51956 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.36□□□□□ -1.55
NEK3P51956 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.36□□□□□ -1.55
NEK3P51956 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.36□□□□□ -1.55
NEK3P51956 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.36□□□□□ -1.55
NEK3P51956 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
NEK3P51956 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.36□□□□□ -1.55
NEK3P51956 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NEK3P51956 HMGN2P6-201ENST00000551091 273 ntBASIC5.36□□□□□ -1.55
NEK3P51956 AC015688.2-201ENST00000584523 262 ntBASIC5.36□□□□□ -1.55
NEK3P51956 AP001269.3-201ENST00000588718 329 ntBASIC5.36□□□□□ -1.55
NEK3P51956 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.36□□□□□ -1.55
NEK3P51956 AC234772.3-201ENST00000602277 528 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms