Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 AL512624.1-201ENST00000613638 469 ntBASIC6.07□□□□□ -1.44
COL8A1P27658 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC6.07□□□□□ -1.44
COL8A1P27658 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC6.07□□□□□ -1.44
COL8A1P27658 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.07□□□□□ -1.44
COL8A1P27658 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC6.07□□□□□ -1.44
COL8A1P27658 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.07□□□□□ -1.44
COL8A1P27658 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
COL8A1P27658 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC6.07□□□□□ -1.44
COL8A1P27658 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL8A1P27658 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL8A1P27658 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL8A1P27658 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL8A1P27658 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
COL8A1P27658 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
COL8A1P27658 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL8A1P27658 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL8A1P27658 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL8A1P27658 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.07□□□□□ -1.44
COL8A1P27658 AC011592.1-201ENST00000624647 3634 ntBASIC6.07□□□□□ -1.44
COL8A1P27658 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC6.07□□□□□ -1.44
COL8A1P27658 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL8A1P27658 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL8A1P27658 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL8A1P27658 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC6.07□□□□□ -1.44
COL8A1P27658 SPATA2P1-201ENST00000431223 2055 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 TATDN2P3-201ENST00000452855 3665 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.06□□□□□ -1.44
COL8A1P27658 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.06□□□□□ -1.44
COL8A1P27658 AL442128.2-201ENST00000620246 1824 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL8A1P27658 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC6.06□□□□□ -1.44
COL8A1P27658 AC018688.1-201ENST00000636528 1754 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC6.06□□□□□ -1.44
COL8A1P27658 ZNF652P1-201ENST00000442420 1309 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.06□□□□□ -1.44
COL8A1P27658 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL8A1P27658 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL8A1P27658 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.06□□□□□ -1.44
COL8A1P27658 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL8A1P27658 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
COL8A1P27658 RNU6-770P-201ENST00000363929 105 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 RNU6-777P-201ENST00000364265 104 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 RNA5SP485-201ENST00000365053 119 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.06□□□□□ -1.44
COL8A1P27658 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL8A1P27658 RNU6-187P-201ENST00000384139 106 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 RNU6-662P-201ENST00000384253 104 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 SSXP10-201ENST00000402595 565 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 AL139397.2-201ENST00000404529 772 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL8A1P27658 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.06□□□□□ -1.44
COL8A1P27658 CHEK2P5-201ENST00000423877 246 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 AC003989.1-201ENST00000434569 565 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 AL645939.3-201ENST00000435408 225 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 MYL6P3-201ENST00000436904 432 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 AC092013.1-201ENST00000438795 332 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.06□□□□□ -1.44
COL8A1P27658 AL590664.1-201ENST00000448065 339 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.06□□□□□ -1.44
COL8A1P27658 BX323845.2-201ENST00000458382 234 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 RN7SL870P-201ENST00000460111 296 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 RN7SL284P-201ENST00000498823 275 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC6.06□□□□□ -1.44
COL8A1P27658 LIAS-206ENST00000513731 826 ntTSL 5 BASIC6.06□□□□□ -1.44
COL8A1P27658 RNU6-201P-201ENST00000517100 61 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.06□□□□□ -1.44
COL8A1P27658 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL8A1P27658 AP001804.3-201ENST00000525146 880 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.06□□□□□ -1.44
COL8A1P27658 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.06□□□□□ -1.44
COL8A1P27658 OR5M2P-201ENST00000529003 936 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.06□□□□□ -1.44
COL8A1P27658 OR8R1P-201ENST00000543943 764 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.06□□□□□ -1.44
COL8A1P27658 UBE2CP1-201ENST00000557130 554 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC6.06□□□□□ -1.44
COL8A1P27658 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.06□□□□□ -1.44
COL8A1P27658 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL8A1P27658 BX664608.1-201ENST00000610519 487 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 FTX_2.1-201ENST00000618816 94 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 PLCE1P1-201ENST00000622094 305 ntBASIC6.06□□□□□ -1.44
COL8A1P27658 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.06□□□□□ -1.44
COL8A1P27658 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL8A1P27658 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL8A1P27658 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL8A1P27658 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC6.06□□□□□ -1.44
COL8A1P27658 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
COL8A1P27658 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
COL8A1P27658 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
COL8A1P27658 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL8A1P27658 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL8A1P27658 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
COL8A1P27658 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL8A1P27658 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL8A1P27658 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL8A1P27658 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
COL8A1P27658 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC6.06□□□□□ -1.44
COL8A1P27658 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL8A1P27658 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms