Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RPL12P25-201ENST00000455592 494 ntBASIC6.95□□□□□ -1.3
VARSP26640 RBMY2EP-202ENST00000456360 940 ntBASIC6.95□□□□□ -1.3
VARSP26640 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.95□□□□□ -1.3
VARSP26640 RN7SL834P-201ENST00000461450 286 ntBASIC6.95□□□□□ -1.3
VARSP26640 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.95□□□□□ -1.3
VARSP26640 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.95□□□□□ -1.3
VARSP26640 CHCHD2P7-201ENST00000508008 452 ntBASIC6.95□□□□□ -1.3
VARSP26640 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC6.95□□□□□ -1.3
VARSP26640 AC004062.1-201ENST00000509926 645 ntBASIC6.95□□□□□ -1.3
VARSP26640 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.95□□□□□ -1.3
VARSP26640 RPL39P5-202ENST00000512505 151 ntBASIC6.95□□□□□ -1.3
VARSP26640 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC6.95□□□□□ -1.3
VARSP26640 RNU6-406P-201ENST00000516470 107 ntBASIC6.95□□□□□ -1.3
VARSP26640 RNU6-410P-201ENST00000517006 107 ntBASIC6.95□□□□□ -1.3
VARSP26640 IGLV1-62-201ENST00000518003 441 ntBASIC6.95□□□□□ -1.3
VARSP26640 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.95□□□□□ -1.3
VARSP26640 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC6.95□□□□□ -1.3
VARSP26640 GLYATL1P4-201ENST00000529326 906 ntBASIC6.95□□□□□ -1.3
VARSP26640 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC6.95□□□□□ -1.3
VARSP26640 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC6.95□□□□□ -1.3
VARSP26640 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.95□□□□□ -1.3
VARSP26640 AC092718.4-201ENST00000566639 716 ntBASIC6.95□□□□□ -1.3
VARSP26640 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.95□□□□□ -1.3
VARSP26640 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC6.95□□□□□ -1.3
VARSP26640 AC061975.3-201ENST00000583209 244 ntBASIC6.95□□□□□ -1.3
VARSP26640 IGLJCOR18-201ENST00000584002 424 ntBASIC6.95□□□□□ -1.3
VARSP26640 MIR3942-201ENST00000585264 109 ntBASIC6.95□□□□□ -1.3
VARSP26640 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC6.95□□□□□ -1.3
VARSP26640 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.95□□□□□ -1.3
VARSP26640 AL391813.2-201ENST00000609113 322 ntBASIC6.95□□□□□ -1.3
VARSP26640 uc_338.37-201ENST00000620113 186 ntBASIC6.95□□□□□ -1.3
VARSP26640 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.95□□□□□ -1.3
VARSP26640 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.95□□□□□ -1.3
VARSP26640 AC006453.3-201ENST00000635891 377 ntBASIC6.95□□□□□ -1.3
VARSP26640 AC135068.11-201ENST00000636378 921 ntBASIC6.95□□□□□ -1.3
VARSP26640 THUMPD3P1-201ENST00000506556 1480 ntBASIC6.95□□□□□ -1.3
VARSP26640 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
VARSP26640 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
VARSP26640 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
VARSP26640 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.95□□□□□ -1.3
VARSP26640 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.95□□□□□ -1.3
VARSP26640 AC025125.1-201ENST00000624743 1922 ntBASIC6.95□□□□□ -1.3
VARSP26640 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.95□□□□□ -1.3
VARSP26640 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
VARSP26640 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
VARSP26640 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.95□□□□□ -1.3
VARSP26640 HDAC1P2-201ENST00000453661 1398 ntBASIC6.95□□□□□ -1.3
VARSP26640 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.95□□□□□ -1.3
VARSP26640 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.94□□□□□ -1.3
VARSP26640 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
VARSP26640 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
VARSP26640 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
VARSP26640 AC011493.1-201ENST00000596753 1632 ntBASIC6.94□□□□□ -1.3
VARSP26640 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.94□□□□□ -1.3
VARSP26640 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VARSP26640 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.94□□□□□ -1.3
VARSP26640 AC125232.1-201ENST00000452554 1408 ntBASIC6.94□□□□□ -1.3
VARSP26640 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
VARSP26640 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
VARSP26640 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.94□□□□□ -1.3
VARSP26640 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
VARSP26640 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VARSP26640 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.94□□□□□ -1.3
VARSP26640 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
VARSP26640 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.94□□□□□ -1.3
VARSP26640 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
VARSP26640 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.94□□□□□ -1.3
VARSP26640 Y_RNA.5-201ENST00000362334 102 ntBASIC6.94□□□□□ -1.3
VARSP26640 Y_RNA.414-201ENST00000384011 101 ntBASIC6.94□□□□□ -1.3
VARSP26640 MIR199B-201ENST00000384849 110 ntBASIC6.94□□□□□ -1.3
VARSP26640 AL590762.1-201ENST00000391782 432 ntBASIC6.94□□□□□ -1.3
VARSP26640 FDPSP5-201ENST00000399474 1057 ntBASIC6.94□□□□□ -1.3
VARSP26640 AL096800.1-201ENST00000405326 893 ntBASIC6.94□□□□□ -1.3
VARSP26640 RNU6ATAC23P-201ENST00000408448 123 ntBASIC6.94□□□□□ -1.3
VARSP26640 RN7SKP158-201ENST00000410453 326 ntBASIC6.94□□□□□ -1.3
VARSP26640 RN7SKP108-201ENST00000411367 328 ntBASIC6.94□□□□□ -1.3
VARSP26640 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.94□□□□□ -1.3
VARSP26640 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC6.94□□□□□ -1.3
VARSP26640 AC008267.5-201ENST00000424928 265 ntBASIC6.94□□□□□ -1.3
VARSP26640 MRPS21P3-201ENST00000436696 262 ntBASIC6.94□□□□□ -1.3
VARSP26640 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC6.94□□□□□ -1.3
VARSP26640 AC073909.1-201ENST00000447112 999 ntBASIC6.94□□□□□ -1.3
VARSP26640 CYCSP44-201ENST00000448560 313 ntBASIC6.94□□□□□ -1.3
VARSP26640 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.94□□□□□ -1.3
VARSP26640 RPS20P32-201ENST00000456044 356 ntBASIC6.94□□□□□ -1.3
VARSP26640 AC019084.1-201ENST00000457337 432 ntBASIC6.94□□□□□ -1.3
VARSP26640 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC6.94□□□□□ -1.3
VARSP26640 RPS10P20-201ENST00000494130 463 ntBASIC6.94□□□□□ -1.3
VARSP26640 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.94□□□□□ -1.3
VARSP26640 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.94□□□□□ -1.3
VARSP26640 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.94□□□□□ -1.3
VARSP26640 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.94□□□□□ -1.3
VARSP26640 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC6.94□□□□□ -1.3
VARSP26640 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.94□□□□□ -1.3
VARSP26640 RN7SKP24-201ENST00000515888 284 ntBASIC6.94□□□□□ -1.3
VARSP26640 SNORA25.10-201ENST00000515926 124 ntBASIC6.94□□□□□ -1.3
VARSP26640 SCARNA24.1-201ENST00000516465 137 ntBASIC6.94□□□□□ -1.3
VARSP26640 RNU6-1088P-201ENST00000516850 104 ntBASIC6.94□□□□□ -1.3
VARSP26640 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.94□□□□□ -1.3
VARSP26640 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms