Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 OR7E128P-201ENST00000532736 1024 ntBASIC4.8□□□□□ -1.64
PCNAP12004 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.8□□□□□ -1.64
PCNAP12004 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PCNAP12004 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.8□□□□□ -1.64
PCNAP12004 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PCNAP12004 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.8□□□□□ -1.64
PCNAP12004 MTCO1P40-201ENST00000574371 625 ntBASIC4.8□□□□□ -1.64
PCNAP12004 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.8□□□□□ -1.64
PCNAP12004 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.8□□□□□ -1.64
PCNAP12004 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.8□□□□□ -1.64
PCNAP12004 AC009159.2-201ENST00000617603 606 ntBASIC4.8□□□□□ -1.64
PCNAP12004 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.8□□□□□ -1.64
PCNAP12004 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.8□□□□□ -1.64
PCNAP12004 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.8□□□□□ -1.64
PCNAP12004 AL590763.1-201ENST00000398297 1545 ntBASIC4.8□□□□□ -1.64
PCNAP12004 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
PCNAP12004 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCNAP12004 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCNAP12004 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
PCNAP12004 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PCNAP12004 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
PCNAP12004 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.79□□□□□ -1.64
PCNAP12004 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PCNAP12004 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PCNAP12004 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
PCNAP12004 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCNAP12004 Y_RNA.472-201ENST00000384322 102 ntBASIC4.79□□□□□ -1.64
PCNAP12004 AC092642.1-201ENST00000392417 425 ntBASIC4.79□□□□□ -1.64
PCNAP12004 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCNAP12004 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCNAP12004 RNU4-22P-201ENST00000411058 166 ntBASIC4.79□□□□□ -1.64
PCNAP12004 AC092745.2-202ENST00000411880 369 ntBASIC4.79□□□□□ -1.64
PCNAP12004 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.79□□□□□ -1.64
PCNAP12004 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.79□□□□□ -1.64
PCNAP12004 RPS12P5-201ENST00000423449 371 ntBASIC4.79□□□□□ -1.64
PCNAP12004 IPMKP1-201ENST00000425988 855 ntBASIC4.79□□□□□ -1.64
PCNAP12004 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.79□□□□□ -1.64
PCNAP12004 USP9YP24-201ENST00000434374 697 ntBASIC4.79□□□□□ -1.64
PCNAP12004 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.79□□□□□ -1.64
PCNAP12004 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.79□□□□□ -1.64
PCNAP12004 USP9YP17-201ENST00000444617 696 ntBASIC4.79□□□□□ -1.64
PCNAP12004 AL163193.1-201ENST00000444895 788 ntBASIC4.79□□□□□ -1.64
PCNAP12004 MTND1P33-201ENST00000446251 917 ntBASIC4.79□□□□□ -1.64
PCNAP12004 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.79□□□□□ -1.64
PCNAP12004 KNOP1P3-201ENST00000446933 426 ntBASIC4.79□□□□□ -1.64
PCNAP12004 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.79□□□□□ -1.64
PCNAP12004 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.79□□□□□ -1.64
PCNAP12004 RN7SL799P-201ENST00000475891 298 ntBASIC4.79□□□□□ -1.64
PCNAP12004 AC090114.3-201ENST00000479267 829 ntBASIC4.79□□□□□ -1.64
PCNAP12004 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.79□□□□□ -1.64
PCNAP12004 AC091860.1-201ENST00000505723 432 ntBASIC4.79□□□□□ -1.64
PCNAP12004 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.79□□□□□ -1.64
PCNAP12004 AC104108.1-201ENST00000509930 412 ntBASIC4.79□□□□□ -1.64
PCNAP12004 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.79□□□□□ -1.64
PCNAP12004 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.79□□□□□ -1.64
PCNAP12004 RN7SKP66-201ENST00000516681 231 ntBASIC4.79□□□□□ -1.64
PCNAP12004 RNA5SP34-201ENST00000516887 130 ntBASIC4.79□□□□□ -1.64
PCNAP12004 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.79□□□□□ -1.64
PCNAP12004 IGLV2-28-201ENST00000520681 304 ntBASIC4.79□□□□□ -1.64
PCNAP12004 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.79□□□□□ -1.64
PCNAP12004 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.79□□□□□ -1.64
PCNAP12004 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.79□□□□□ -1.64
PCNAP12004 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PCNAP12004 HMGB3P26-201ENST00000560051 582 ntBASIC4.79□□□□□ -1.64
PCNAP12004 AC116553.2-201ENST00000564203 463 ntBASIC4.79□□□□□ -1.64
PCNAP12004 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.79□□□□□ -1.64
PCNAP12004 OR1F2P-201ENST00000570470 933 ntBASIC4.79□□□□□ -1.64
PCNAP12004 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.79□□□□□ -1.64
PCNAP12004 MIR7973-1-201ENST00000614683 76 ntBASIC4.79□□□□□ -1.64
PCNAP12004 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.79□□□□□ -1.64
PCNAP12004 AC079395.3-201ENST00000615161 484 ntBASIC4.79□□□□□ -1.64
PCNAP12004 MIR6886-201ENST00000619864 61 ntBASIC4.79□□□□□ -1.64
PCNAP12004 AC123767.1-202ENST00000620407 817 ntBASIC4.79□□□□□ -1.64
PCNAP12004 AL109659.3-201ENST00000624985 950 ntBASIC4.79□□□□□ -1.64
PCNAP12004 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.79□□□□□ -1.64
PCNAP12004 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCNAP12004 AC100871.1-201ENST00000507871 1456 ntBASIC4.79□□□□□ -1.64
PCNAP12004 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.79□□□□□ -1.64
PCNAP12004 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.79□□□□□ -1.64
PCNAP12004 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCNAP12004 MFSD8-220ENST00000641243 1422 ntBASIC4.79□□□□□ -1.64
PCNAP12004 THAP12P4-201ENST00000528321 2266 ntBASIC4.79□□□□□ -1.64
PCNAP12004 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCNAP12004 AC009951.1-201ENST00000623674 2614 ntBASIC4.78□□□□□ -1.64
PCNAP12004 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCNAP12004 AL355578.1-201ENST00000607405 1328 ntBASIC4.78□□□□□ -1.64
PCNAP12004 C4BPAP1-201ENST00000415474 1893 ntBASIC4.78□□□□□ -1.64
PCNAP12004 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PCNAP12004 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCNAP12004 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PCNAP12004 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.78□□□□□ -1.64
PCNAP12004 RNU6-236P-201ENST00000363886 106 ntBASIC4.78□□□□□ -1.64
PCNAP12004 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCNAP12004 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.78□□□□□ -1.64
PCNAP12004 RNU6-224P-201ENST00000384055 107 ntBASIC4.78□□□□□ -1.64
PCNAP12004 SNORD116-12-201ENST00000384468 92 ntBASIC4.78□□□□□ -1.64
PCNAP12004 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PCNAP12004 RNU6-1242P-201ENST00000391052 103 ntBASIC4.78□□□□□ -1.64
PCNAP12004 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCNAP12004 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms