Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 HSPD1P21-201ENST00000436541 245 ntBASIC6.82□□□□□ -1.32
TOP2AP11388 UBDP1-202ENST00000457888 382 ntBASIC6.82□□□□□ -1.32
TOP2AP11388 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.82□□□□□ -1.32
TOP2AP11388 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.82□□□□□ -1.32
TOP2AP11388 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC6.82□□□□□ -1.32
TOP2AP11388 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC6.82□□□□□ -1.32
TOP2AP11388 AC026368.1-201ENST00000614934 690 ntBASIC6.82□□□□□ -1.32
TOP2AP11388 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.82□□□□□ -1.32
TOP2AP11388 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TOP2AP11388 AP000432.2-201ENST00000624164 2048 ntBASIC6.82□□□□□ -1.32
TOP2AP11388 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
TOP2AP11388 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
TOP2AP11388 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TOP2AP11388 RNU1-15P-201ENST00000353977 144 ntBASIC6.81□□□□□ -1.32
TOP2AP11388 ZNF602P-201ENST00000405929 924 ntBASIC6.81□□□□□ -1.32
TOP2AP11388 AC115115.1-201ENST00000449927 248 ntBASIC6.81□□□□□ -1.32
TOP2AP11388 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC6.81□□□□□ -1.32
TOP2AP11388 SUN3-208ENST00000453192 801 ntTSL 5 BASIC6.81□□□□□ -1.32
TOP2AP11388 SNRPCP3-201ENST00000474888 476 ntBASIC6.81□□□□□ -1.32
TOP2AP11388 SETP14-201ENST00000497538 873 ntBASIC6.81□□□□□ -1.32
TOP2AP11388 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC6.81□□□□□ -1.32
TOP2AP11388 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC6.81□□□□□ -1.32
TOP2AP11388 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.81□□□□□ -1.32
TOP2AP11388 AC020914.6-201ENST00000594327 272 ntBASIC6.81□□□□□ -1.32
TOP2AP11388 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC6.81□□□□□ -1.32
TOP2AP11388 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC6.81□□□□□ -1.32
TOP2AP11388 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TOP2AP11388 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC6.81□□□□□ -1.32
TOP2AP11388 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
TOP2AP11388 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
TOP2AP11388 SNORA3.3-201ENST00000408712 125 ntBASIC6.81□□□□□ -1.32
TOP2AP11388 ARL4AP3-201ENST00000441452 574 ntBASIC6.81□□□□□ -1.32
TOP2AP11388 AL358832.1-201ENST00000497800 389 ntBASIC6.81□□□□□ -1.32
TOP2AP11388 AC025554.1-201ENST00000505641 188 ntBASIC6.81□□□□□ -1.32
TOP2AP11388 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6.81□□□□□ -1.32
TOP2AP11388 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC6.81□□□□□ -1.32
TOP2AP11388 AC084759.1-201ENST00000561168 290 ntBASIC6.81□□□□□ -1.32
TOP2AP11388 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC6.81□□□□□ -1.32
TOP2AP11388 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
TOP2AP11388 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TOP2AP11388 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.8□□□□□ -1.32
TOP2AP11388 AL035425.3-201ENST00000564206 4996 ntBASIC6.8□□□□□ -1.32
TOP2AP11388 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.8□□□□□ -1.32
TOP2AP11388 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC6.8□□□□□ -1.32
TOP2AP11388 GEMIN8P3-201ENST00000445417 720 ntBASIC6.8□□□□□ -1.32
TOP2AP11388 CAB39P1-201ENST00000502277 460 ntBASIC6.8□□□□□ -1.32
TOP2AP11388 IGLV3-26-201ENST00000520756 302 ntBASIC6.8□□□□□ -1.32
TOP2AP11388 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
TOP2AP11388 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC6.8□□□□□ -1.32
TOP2AP11388 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC6.8□□□□□ -1.32
TOP2AP11388 MIR3651-201ENST00000630427 90 ntBASIC6.8□□□□□ -1.32
TOP2AP11388 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
TOP2AP11388 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC6.79□□□□□ -1.32
TOP2AP11388 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC6.79□□□□□ -1.32
TOP2AP11388 AC023632.6-201ENST00000624338 2177 ntBASIC6.79□□□□□ -1.32
TOP2AP11388 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
TOP2AP11388 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
TOP2AP11388 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
TOP2AP11388 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC6.79□□□□□ -1.32
TOP2AP11388 VDAC2P1-201ENST00000399358 958 ntBASIC6.79□□□□□ -1.32
TOP2AP11388 SNORA3C-201ENST00000408792 125 ntBASIC6.79□□□□□ -1.32
TOP2AP11388 RANP8-201ENST00000444720 713 ntBASIC6.79□□□□□ -1.32
TOP2AP11388 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC6.79□□□□□ -1.32
TOP2AP11388 PSMC1P13-201ENST00000458195 985 ntBASIC6.79□□□□□ -1.32
TOP2AP11388 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC6.79□□□□□ -1.32
TOP2AP11388 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC6.79□□□□□ -1.32
TOP2AP11388 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC6.79□□□□□ -1.32
TOP2AP11388 AC008802.1-201ENST00000519121 791 ntBASIC6.79□□□□□ -1.32
TOP2AP11388 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TOP2AP11388 OR4A2P-201ENST00000527276 913 ntBASIC6.79□□□□□ -1.32
TOP2AP11388 OR8I1P-201ENST00000529291 931 ntBASIC6.79□□□□□ -1.32
TOP2AP11388 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC6.79□□□□□ -1.32
TOP2AP11388 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC6.79□□□□□ -1.32
TOP2AP11388 AL137849.1-201ENST00000604767 169 ntBASIC6.79□□□□□ -1.32
TOP2AP11388 AL160281.1-201ENST00000605307 311 ntBASIC6.79□□□□□ -1.32
TOP2AP11388 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.79□□□□□ -1.32
TOP2AP11388 SMCR2_2.1-201ENST00000619783 161 ntBASIC6.79□□□□□ -1.32
TOP2AP11388 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.79□□□□□ -1.32
TOP2AP11388 PRO1804-201ENST00000623780 2050 ntBASIC6.79□□□□□ -1.32
TOP2AP11388 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
TOP2AP11388 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
TOP2AP11388 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TOP2AP11388 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
TOP2AP11388 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
TOP2AP11388 RPL7P60-201ENST00000397636 735 ntBASIC6.78□□□□□ -1.32
TOP2AP11388 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC6.78□□□□□ -1.32
TOP2AP11388 RNU2-65P-201ENST00000410162 185 ntBASIC6.78□□□□□ -1.32
TOP2AP11388 AC073387.1-201ENST00000453261 709 ntBASIC6.78□□□□□ -1.32
TOP2AP11388 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TOP2AP11388 snoU13.24-201ENST00000458998 104 ntBASIC6.78□□□□□ -1.32
TOP2AP11388 AC007458.1-201ENST00000542812 373 ntBASIC6.78□□□□□ -1.32
TOP2AP11388 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.78□□□□□ -1.32
TOP2AP11388 MIR3936-201ENST00000584304 110 ntBASIC6.78□□□□□ -1.32
TOP2AP11388 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC6.78□□□□□ -1.32
TOP2AP11388 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TOP2AP11388 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
TOP2AP11388 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
TOP2AP11388 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
TOP2AP11388 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TOP2AP11388 SAMMSON-213ENST00000641336 1521 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms