Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CHGAP10645 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
CHGAP10645 AL592429.1-201ENST00000403909 1473 ntBASIC9.24□□□□□ -0.93
CHGAP10645 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHGAP10645 Y_RNA.202-201ENST00000364083 110 ntBASIC9.24□□□□□ -0.93
CHGAP10645 Y_RNA.387-201ENST00000383918 102 ntBASIC9.24□□□□□ -0.93
CHGAP10645 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC9.24□□□□□ -0.93
CHGAP10645 AL121776.1-201ENST00000429337 372 ntBASIC9.24□□□□□ -0.93
CHGAP10645 AC003989.1-201ENST00000434569 565 ntBASIC9.24□□□□□ -0.93
CHGAP10645 BNIP3P2-201ENST00000441221 577 ntBASIC9.24□□□□□ -0.93
CHGAP10645 GAPDHP14-201ENST00000450472 937 ntBASIC9.24□□□□□ -0.93
CHGAP10645 SNORD19B-201ENST00000459623 84 ntBASIC9.24□□□□□ -0.93
CHGAP10645 RPL7P15-201ENST00000461190 712 ntBASIC9.24□□□□□ -0.93
CHGAP10645 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC9.24□□□□□ -0.93
CHGAP10645 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC9.24□□□□□ -0.93
CHGAP10645 AC112206.3-201ENST00000514578 389 ntBASIC9.24□□□□□ -0.93
CHGAP10645 LY96-202ENST00000518893 430 ntTSL 3 BASIC9.24□□□□□ -0.93
CHGAP10645 AC022861.1-201ENST00000522981 663 ntBASIC9.24□□□□□ -0.93
CHGAP10645 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC9.24□□□□□ -0.93
CHGAP10645 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC9.24□□□□□ -0.93
CHGAP10645 MTCYBP13-201ENST00000578634 1093 ntBASIC9.24□□□□□ -0.93
CHGAP10645 AC005332.4-201ENST00000592752 579 ntBASIC9.24□□□□□ -0.93
CHGAP10645 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
CHGAP10645 MIR6886-201ENST00000619864 61 ntBASIC9.24□□□□□ -0.93
CHGAP10645 OXSM-209ENST00000626005 309 ntTSL 3 BASIC9.24□□□□□ -0.93
CHGAP10645 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC9.24□□□□□ -0.93
CHGAP10645 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHGAP10645 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC9.24□□□□□ -0.93
CHGAP10645 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC9.24□□□□□ -0.93
CHGAP10645 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
CHGAP10645 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHGAP10645 SELE-203ENST00000367775 3389 ntTSL 5 BASIC9.24□□□□□ -0.93
CHGAP10645 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CHGAP10645 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
CHGAP10645 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CHGAP10645 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CHGAP10645 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CHGAP10645 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC9.23□□□□□ -0.93
CHGAP10645 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CHGAP10645 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CHGAP10645 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
CHGAP10645 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
CHGAP10645 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
CHGAP10645 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC9.23□□□□□ -0.93
CHGAP10645 AC008937.3-201ENST00000606813 1700 ntBASIC9.23□□□□□ -0.93
CHGAP10645 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
CHGAP10645 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CHGAP10645 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
CHGAP10645 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC9.23□□□□□ -0.93
CHGAP10645 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CHGAP10645 RNU6-730P-201ENST00000383954 104 ntBASIC9.23□□□□□ -0.93
CHGAP10645 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC9.23□□□□□ -0.93
CHGAP10645 AL353777.1-201ENST00000425552 326 ntBASIC9.23□□□□□ -0.93
CHGAP10645 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC9.23□□□□□ -0.93
CHGAP10645 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC9.23□□□□□ -0.93
CHGAP10645 MORF4-201ENST00000447135 971 ntBASIC9.23□□□□□ -0.93
CHGAP10645 PRPF38AP1-201ENST00000451976 933 ntBASIC9.23□□□□□ -0.93
CHGAP10645 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC9.23□□□□□ -0.93
CHGAP10645 FGF7P3-201ENST00000454645 303 ntBASIC9.23□□□□□ -0.93
CHGAP10645 RN7SL714P-201ENST00000487050 298 ntBASIC9.23□□□□□ -0.93
CHGAP10645 RN7SL561P-201ENST00000488553 281 ntBASIC9.23□□□□□ -0.93
CHGAP10645 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
CHGAP10645 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC9.23□□□□□ -0.93
CHGAP10645 MIR3167-201ENST00000579623 85 ntBASIC9.23□□□□□ -0.93
CHGAP10645 RPL26P30-202ENST00000602923 645 ntBASIC9.23□□□□□ -0.93
CHGAP10645 AC010591.1-201ENST00000603941 649 ntBASIC9.23□□□□□ -0.93
CHGAP10645 SNORA74.4-201ENST00000607595 199 ntBASIC9.23□□□□□ -0.93
CHGAP10645 AC104237.2-201ENST00000612456 443 ntBASIC9.23□□□□□ -0.93
CHGAP10645 AC015712.7-201ENST00000615211 635 ntBASIC9.23□□□□□ -0.93
CHGAP10645 AL512652.1-201ENST00000619006 500 ntBASIC9.23□□□□□ -0.93
CHGAP10645 ATM-228ENST00000639240 498 ntTSL 5 BASIC9.23□□□□□ -0.93
CHGAP10645 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC9.23□□□□□ -0.93
CHGAP10645 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC9.23□□□□□ -0.93
CHGAP10645 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CHGAP10645 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
CHGAP10645 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
CHGAP10645 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CHGAP10645 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
CHGAP10645 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CHGAP10645 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CHGAP10645 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC9.23□□□□□ -0.93
CHGAP10645 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CHGAP10645 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
CHGAP10645 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CHGAP10645 MTND5P16-201ENST00000460269 1703 ntBASIC9.22□□□□□ -0.93
CHGAP10645 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC9.22□□□□□ -0.93
CHGAP10645 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CHGAP10645 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
CHGAP10645 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC9.22□□□□□ -0.93
CHGAP10645 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
CHGAP10645 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CHGAP10645 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CHGAP10645 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CHGAP10645 RNA5SP346-201ENST00000363541 121 ntBASIC9.22□□□□□ -0.93
CHGAP10645 SNORA32.2-201ENST00000384049 122 ntBASIC9.22□□□□□ -0.93
CHGAP10645 BTBD10P2-201ENST00000404779 676 ntBASIC9.22□□□□□ -0.93
CHGAP10645 CHEK2P5-201ENST00000423877 246 ntBASIC9.22□□□□□ -0.93
CHGAP10645 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC9.22□□□□□ -0.93
CHGAP10645 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC9.22□□□□□ -0.93
CHGAP10645 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC9.22□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms