Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AP005264.7-201ENST00000625003 745 ntBASIC3.18□□□□□ -1.9
CXCL1P09341 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.18□□□□□ -1.9
CXCL1P09341 OR5AC4P-202ENST00000642086 985 ntBASIC3.18□□□□□ -1.9
CXCL1P09341 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CXCL1P09341 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CXCL1P09341 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CXCL1P09341 AC132825.1-201ENST00000463573 2247 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CXCL1P09341 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CXCL1P09341 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CXCL1P09341 AP001486.2-201ENST00000561652 5113 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.17□□□□□ -1.9
CXCL1P09341 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
CXCL1P09341 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CXCL1P09341 RNU4-7P-201ENST00000364758 141 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CXCL1P09341 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CXCL1P09341 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CXCL1P09341 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
CXCL1P09341 RNU6-171P-201ENST00000384354 107 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 AC097374.1-203ENST00000400783 485 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.17□□□□□ -1.9
CXCL1P09341 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.17□□□□□ -1.9
CXCL1P09341 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC3.17□□□□□ -1.9
CXCL1P09341 RPL21P109-201ENST00000422213 475 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.17□□□□□ -1.9
CXCL1P09341 AP001324.1-201ENST00000428553 399 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.17□□□□□ -1.9
CXCL1P09341 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.17□□□□□ -1.9
CXCL1P09341 CEACAMP1-201ENST00000434624 1035 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CXCL1P09341 TXNP1-201ENST00000441872 371 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 CEACAMP7-201ENST00000444105 496 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.17□□□□□ -1.9
CXCL1P09341 EEF1B2P5-201ENST00000444820 548 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.17□□□□□ -1.9
CXCL1P09341 AC018638.3-201ENST00000461273 132 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 AC063943.1-201ENST00000465434 453 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 AC005532.2-201ENST00000467154 373 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 AC053481.1-201ENST00000467217 306 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 RN7SL329P-201ENST00000467740 299 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 AC011005.3-201ENST00000491624 395 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.17□□□□□ -1.9
CXCL1P09341 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC3.17□□□□□ -1.9
CXCL1P09341 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.17□□□□□ -1.9
CXCL1P09341 CYP2C60P-201ENST00000566088 139 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 AC021483.2-201ENST00000567415 758 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.17□□□□□ -1.9
CXCL1P09341 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.17□□□□□ -1.9
CXCL1P09341 MIR1269B-201ENST00000580405 75 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.17□□□□□ -1.9
CXCL1P09341 AC090953.1-201ENST00000604305 1092 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 AC104662.1-201ENST00000604448 511 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 RMST_8.1-201ENST00000610287 165 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 AL021997.2-201ENST00000615674 271 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 AL035461.2-201ENST00000619201 524 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 AC007546.1-201ENST00000619452 559 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC3.17□□□□□ -1.9
CXCL1P09341 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.17□□□□□ -1.9
CXCL1P09341 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.17□□□□□ -1.9
CXCL1P09341 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.17□□□□□ -1.9
CXCL1P09341 UBE3AP2-201ENST00000429033 2259 ntBASIC3.17□□□□□ -1.9
CXCL1P09341 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CXCL1P09341 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CXCL1P09341 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.17□□□□□ -1.9
CXCL1P09341 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.16□□□□□ -1.9
CXCL1P09341 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.16□□□□□ -1.9
CXCL1P09341 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CXCL1P09341 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CXCL1P09341 AC066616.2-201ENST00000559334 1481 ntBASIC3.16□□□□□ -1.9
CXCL1P09341 EXOC5P1-201ENST00000510543 1969 ntBASIC3.16□□□□□ -1.9
CXCL1P09341 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CXCL1P09341 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CXCL1P09341 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
CXCL1P09341 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CXCL1P09341 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CXCL1P09341 AL590240.1-201ENST00000334118 313 ntBASIC3.16□□□□□ -1.9
CXCL1P09341 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CXCL1P09341 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
CXCL1P09341 FAR2P2-201ENST00000413041 594 ntBASIC3.16□□□□□ -1.9
CXCL1P09341 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CXCL1P09341 AC004074.1-201ENST00000421810 1063 ntBASIC3.16□□□□□ -1.9
CXCL1P09341 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.16□□□□□ -1.9
CXCL1P09341 AC092013.1-201ENST00000438795 332 ntBASIC3.16□□□□□ -1.9
CXCL1P09341 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.16□□□□□ -1.9
CXCL1P09341 RPS29P31-201ENST00000446147 164 ntBASIC3.16□□□□□ -1.9
CXCL1P09341 ARL2BPP10-201ENST00000446487 531 ntBASIC3.16□□□□□ -1.9
CXCL1P09341 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.16□□□□□ -1.9
CXCL1P09341 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.16□□□□□ -1.9
CXCL1P09341 RPSAP50-201ENST00000481955 852 ntBASIC3.16□□□□□ -1.9
CXCL1P09341 RN7SL101P-201ENST00000496350 279 ntBASIC3.16□□□□□ -1.9
CXCL1P09341 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.16□□□□□ -1.9
CXCL1P09341 AC010374.1-201ENST00000503762 1237 ntBASIC3.16□□□□□ -1.9
CXCL1P09341 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.16□□□□□ -1.9
CXCL1P09341 ATP1B1P1-201ENST00000509767 915 ntBASIC3.16□□□□□ -1.9
CXCL1P09341 AC106872.4-201ENST00000510050 523 ntBASIC3.16□□□□□ -1.9
CXCL1P09341 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.16□□□□□ -1.9
CXCL1P09341 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC3.16□□□□□ -1.9
CXCL1P09341 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.16□□□□□ -1.9
CXCL1P09341 OR7E10P-201ENST00000526420 991 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms