Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 SPRR2C-201ENST00000290702 219 ntBASIC4.72□□□□□ -1.65
VTNP04004 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
VTNP04004 RNU4-7P-201ENST00000364758 141 ntBASIC4.72□□□□□ -1.65
VTNP04004 PTGES3P2-201ENST00000407942 482 ntBASIC4.72□□□□□ -1.65
VTNP04004 RN7SKP167-201ENST00000411047 285 ntBASIC4.72□□□□□ -1.65
VTNP04004 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.72□□□□□ -1.65
VTNP04004 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.72□□□□□ -1.65
VTNP04004 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.72□□□□□ -1.65
VTNP04004 EEF1A1P1-201ENST00000447052 739 ntBASIC4.72□□□□□ -1.65
VTNP04004 RPS4XP12-201ENST00000461747 709 ntBASIC4.72□□□□□ -1.65
VTNP04004 AC108729.2-201ENST00000476543 840 ntBASIC4.72□□□□□ -1.65
VTNP04004 AC021087.2-201ENST00000504656 1203 ntBASIC4.72□□□□□ -1.65
VTNP04004 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.72□□□□□ -1.65
VTNP04004 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.72□□□□□ -1.65
VTNP04004 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.72□□□□□ -1.65
VTNP04004 AC016550.3-201ENST00000515706 767 ntBASIC4.72□□□□□ -1.65
VTNP04004 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.72□□□□□ -1.65
VTNP04004 AC109635.6-201ENST00000525487 1113 ntBASIC4.72□□□□□ -1.65
VTNP04004 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.72□□□□□ -1.65
VTNP04004 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.72□□□□□ -1.65
VTNP04004 CR383656.14-201ENST00000551951 406 ntBASIC4.72□□□□□ -1.65
VTNP04004 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.72□□□□□ -1.65
VTNP04004 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
VTNP04004 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.72□□□□□ -1.65
VTNP04004 AC079148.1-201ENST00000565944 819 ntBASIC4.72□□□□□ -1.65
VTNP04004 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.72□□□□□ -1.65
VTNP04004 SNX6P1-201ENST00000601728 1224 ntBASIC4.72□□□□□ -1.65
VTNP04004 AL109618.2-201ENST00000605527 211 ntBASIC4.72□□□□□ -1.65
VTNP04004 AC019131.2-201ENST00000609071 870 ntBASIC4.72□□□□□ -1.65
VTNP04004 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.72□□□□□ -1.65
VTNP04004 FAM27D1-201ENST00000612308 341 ntBASIC4.72□□□□□ -1.65
VTNP04004 CR589904.2-201ENST00000612533 440 ntBASIC4.72□□□□□ -1.65
VTNP04004 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.72□□□□□ -1.65
VTNP04004 AL445493.3-201ENST00000619568 477 ntBASIC4.72□□□□□ -1.65
VTNP04004 AC006249.1-201ENST00000621223 471 ntBASIC4.72□□□□□ -1.65
VTNP04004 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
VTNP04004 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.72□□□□□ -1.65
VTNP04004 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VTNP04004 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VTNP04004 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.72□□□□□ -1.65
VTNP04004 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.72□□□□□ -1.65
VTNP04004 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VTNP04004 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VTNP04004 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VTNP04004 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.72□□□□□ -1.65
VTNP04004 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
VTNP04004 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VTNP04004 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.72□□□□□ -1.65
VTNP04004 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.72□□□□□ -1.65
VTNP04004 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.65
VTNP04004 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
VTNP04004 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
VTNP04004 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VTNP04004 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VTNP04004 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VTNP04004 MIR372-201ENST00000362225 67 ntBASIC4.71□□□□□ -1.66
VTNP04004 RNU6-249P-201ENST00000363016 102 ntBASIC4.71□□□□□ -1.66
VTNP04004 SNORD51.1-201ENST00000365405 77 ntBASIC4.71□□□□□ -1.66
VTNP04004 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.71□□□□□ -1.66
VTNP04004 RNU1-44P-201ENST00000384453 163 ntBASIC4.71□□□□□ -1.66
VTNP04004 SNORA37-201ENST00000384504 129 ntBASIC4.71□□□□□ -1.66
VTNP04004 SNORD96B-201ENST00000386148 79 ntBASIC4.71□□□□□ -1.66
VTNP04004 MIR1911-201ENST00000410783 80 ntBASIC4.71□□□□□ -1.66
VTNP04004 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.71□□□□□ -1.66
VTNP04004 AL121882.1-201ENST00000422893 417 ntBASIC4.71□□□□□ -1.66
VTNP04004 HSPE1P16-201ENST00000426640 348 ntBASIC4.71□□□□□ -1.66
VTNP04004 UBE2V1P6-201ENST00000430840 422 ntBASIC4.71□□□□□ -1.66
VTNP04004 CEACAMP1-201ENST00000434624 1035 ntBASIC4.71□□□□□ -1.66
VTNP04004 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.71□□□□□ -1.66
VTNP04004 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.71□□□□□ -1.66
VTNP04004 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.71□□□□□ -1.66
VTNP04004 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VTNP04004 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.71□□□□□ -1.66
VTNP04004 AC069277.2-201ENST00000454211 432 ntBASIC4.71□□□□□ -1.66
VTNP04004 HSPE1P22-201ENST00000456856 327 ntBASIC4.71□□□□□ -1.66
VTNP04004 ATP5G1P3-201ENST00000463301 410 ntBASIC4.71□□□□□ -1.66
VTNP04004 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.71□□□□□ -1.66
VTNP04004 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.71□□□□□ -1.66
VTNP04004 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.71□□□□□ -1.66
VTNP04004 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.71□□□□□ -1.66
VTNP04004 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.71□□□□□ -1.66
VTNP04004 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.71□□□□□ -1.66
VTNP04004 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.71□□□□□ -1.66
VTNP04004 AC006116.5-201ENST00000591936 559 ntBASIC4.71□□□□□ -1.66
VTNP04004 AC005034.4-201ENST00000603612 899 ntBASIC4.71□□□□□ -1.66
VTNP04004 MIR6867-201ENST00000610636 67 ntBASIC4.71□□□□□ -1.66
VTNP04004 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.71□□□□□ -1.66
VTNP04004 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.71□□□□□ -1.66
VTNP04004 AC015871.5-202ENST00000623252 701 ntBASIC4.71□□□□□ -1.66
VTNP04004 AC106858.1-201ENST00000637497 429 ntBASIC4.71□□□□□ -1.66
VTNP04004 AC008013.2-202ENST00000637965 364 ntBASIC4.71□□□□□ -1.66
VTNP04004 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
VTNP04004 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VTNP04004 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.71□□□□□ -1.66
VTNP04004 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
VTNP04004 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
VTNP04004 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
VTNP04004 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.7□□□□□ -1.66
VTNP04004 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.7□□□□□ -1.66
VTNP04004 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms