Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RPS24P12-201ENST00000402084 394 ntBASIC4.59□□□□□ -1.67
CTDNEP1O95476 LAP3P1-201ENST00000403648 294 ntBASIC4.59□□□□□ -1.67
CTDNEP1O95476 MIR1251-201ENST00000408552 70 ntBASIC4.59□□□□□ -1.67
CTDNEP1O95476 RN7SKP247-201ENST00000411094 308 ntBASIC4.59□□□□□ -1.67
CTDNEP1O95476 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.59□□□□□ -1.67
CTDNEP1O95476 MTND4P26-201ENST00000415971 1359 ntBASIC4.59□□□□□ -1.67
CTDNEP1O95476 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.59□□□□□ -1.67
CTDNEP1O95476 AC108032.1-201ENST00000416706 207 ntBASIC4.59□□□□□ -1.67
CTDNEP1O95476 PTP4A1P1-201ENST00000420539 515 ntBASIC4.59□□□□□ -1.67
CTDNEP1O95476 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.59□□□□□ -1.67
CTDNEP1O95476 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.59□□□□□ -1.67
CTDNEP1O95476 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.59□□□□□ -1.67
CTDNEP1O95476 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.59□□□□□ -1.67
CTDNEP1O95476 AC026726.1-201ENST00000512859 601 ntBASIC4.59□□□□□ -1.67
CTDNEP1O95476 RNA5SP179-201ENST00000517284 121 ntBASIC4.59□□□□□ -1.67
CTDNEP1O95476 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.59□□□□□ -1.67
CTDNEP1O95476 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.59□□□□□ -1.67
CTDNEP1O95476 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CTDNEP1O95476 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.59□□□□□ -1.67
CTDNEP1O95476 AF230666.2-201ENST00000602328 725 ntBASIC4.59□□□□□ -1.67
CTDNEP1O95476 MRPS35P3-201ENST00000603189 709 ntBASIC4.59□□□□□ -1.67
CTDNEP1O95476 AL390816.3-201ENST00000604527 1066 ntBASIC4.59□□□□□ -1.67
CTDNEP1O95476 AC010809.3-201ENST00000621310 641 ntBASIC4.59□□□□□ -1.67
CTDNEP1O95476 AC073530.2-201ENST00000623987 261 ntBASIC4.59□□□□□ -1.67
CTDNEP1O95476 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CTDNEP1O95476 CASC19-261ENST00000641853 1638 ntBASIC4.59□□□□□ -1.67
CTDNEP1O95476 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CTDNEP1O95476 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
CTDNEP1O95476 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CTDNEP1O95476 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
CTDNEP1O95476 AP000756.2-201ENST00000624168 2567 ntBASIC4.59□□□□□ -1.68
CTDNEP1O95476 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.58□□□□□ -1.68
CTDNEP1O95476 AC245100.2-201ENST00000454544 1679 ntBASIC4.58□□□□□ -1.68
CTDNEP1O95476 IQCB2P-201ENST00000401788 1633 ntBASIC4.58□□□□□ -1.68
CTDNEP1O95476 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTDNEP1O95476 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
CTDNEP1O95476 AL022722.2-201ENST00000402519 180 ntBASIC4.58□□□□□ -1.68
CTDNEP1O95476 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTDNEP1O95476 AC092647.1-201ENST00000420654 287 ntBASIC4.58□□□□□ -1.68
CTDNEP1O95476 AC013268.2-201ENST00000420753 337 ntBASIC4.58□□□□□ -1.68
CTDNEP1O95476 HMGB1P32-201ENST00000425971 565 ntBASIC4.58□□□□□ -1.68
CTDNEP1O95476 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.58□□□□□ -1.68
CTDNEP1O95476 AC087650.1-201ENST00000431445 468 ntBASIC4.58□□□□□ -1.68
CTDNEP1O95476 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CTDNEP1O95476 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.58□□□□□ -1.68
CTDNEP1O95476 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.58□□□□□ -1.68
CTDNEP1O95476 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.58□□□□□ -1.68
CTDNEP1O95476 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.58□□□□□ -1.68
CTDNEP1O95476 RPL5P32-201ENST00000454085 879 ntBASIC4.58□□□□□ -1.68
CTDNEP1O95476 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.58□□□□□ -1.68
CTDNEP1O95476 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.58□□□□□ -1.68
CTDNEP1O95476 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.58□□□□□ -1.68
CTDNEP1O95476 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTDNEP1O95476 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.58□□□□□ -1.68
CTDNEP1O95476 AC091516.1-201ENST00000549191 703 ntBASIC4.58□□□□□ -1.68
CTDNEP1O95476 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.58□□□□□ -1.68
CTDNEP1O95476 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTDNEP1O95476 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTDNEP1O95476 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CTDNEP1O95476 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTDNEP1O95476 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.58□□□□□ -1.68
CTDNEP1O95476 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.58□□□□□ -1.68
CTDNEP1O95476 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CTDNEP1O95476 BDP1P-201ENST00000582658 1990 ntBASIC4.58□□□□□ -1.68
CTDNEP1O95476 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.58□□□□□ -1.68
CTDNEP1O95476 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.58□□□□□ -1.68
CTDNEP1O95476 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CTDNEP1O95476 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTDNEP1O95476 MIR372-201ENST00000362225 67 ntBASIC4.57□□□□□ -1.68
CTDNEP1O95476 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.57□□□□□ -1.68
CTDNEP1O95476 EIF4A1P3-201ENST00000411521 244 ntBASIC4.57□□□□□ -1.68
CTDNEP1O95476 OR4C10P-201ENST00000434991 931 ntBASIC4.57□□□□□ -1.68
CTDNEP1O95476 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.57□□□□□ -1.68
CTDNEP1O95476 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.57□□□□□ -1.68
CTDNEP1O95476 RPS23P7-201ENST00000466210 444 ntBASIC4.57□□□□□ -1.68
CTDNEP1O95476 RPS4XP15-201ENST00000489210 795 ntBASIC4.57□□□□□ -1.68
CTDNEP1O95476 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.57□□□□□ -1.68
CTDNEP1O95476 RN7SKP5-201ENST00000517045 272 ntBASIC4.57□□□□□ -1.68
CTDNEP1O95476 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.57□□□□□ -1.68
CTDNEP1O95476 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.57□□□□□ -1.68
CTDNEP1O95476 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.57□□□□□ -1.68
CTDNEP1O95476 AC105036.1-201ENST00000566222 271 ntBASIC4.57□□□□□ -1.68
CTDNEP1O95476 AL137072.1-201ENST00000603444 466 ntBASIC4.57□□□□□ -1.68
CTDNEP1O95476 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.57□□□□□ -1.68
CTDNEP1O95476 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.57□□□□□ -1.68
CTDNEP1O95476 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CTDNEP1O95476 IPO8P1-201ENST00000455509 3109 ntBASIC4.57□□□□□ -1.68
CTDNEP1O95476 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTDNEP1O95476 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTDNEP1O95476 MTND5P23-201ENST00000430812 1655 ntBASIC4.57□□□□□ -1.68
CTDNEP1O95476 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTDNEP1O95476 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTDNEP1O95476 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.57□□□□□ -1.68
CTDNEP1O95476 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTDNEP1O95476 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTDNEP1O95476 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTDNEP1O95476 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTDNEP1O95476 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTDNEP1O95476 AC087190.4-201ENST00000574616 8334 ntBASIC4.56□□□□□ -1.68
CTDNEP1O95476 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms