Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS4BO75351 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS4BO75351 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS4BO75351 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS4BO75351 IGKV7-3-201ENST00000357453 298 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 RN7SKP153-201ENST00000365026 316 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 MIR16-1-201ENST00000385271 89 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 RNU6-757P-201ENST00000410334 100 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 AC098592.1-201ENST00000419352 333 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS4BO75351 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS4BO75351 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS4BO75351 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 AC124944.2-201ENST00000429866 1242 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS4BO75351 USP9YP22-201ENST00000438971 294 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS4BO75351 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS4BO75351 HMGB1P16-201ENST00000447155 540 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
VPS4BO75351 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS4BO75351 RPL5P24-201ENST00000463742 885 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 AC096741.1-201ENST00000472250 846 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS4BO75351 TRBV8-2-201ENST00000475637 270 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 RPS4XP1-201ENST00000482189 787 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 RN7SL97P-201ENST00000486780 299 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 LINC00888-204ENST00000487386 421 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS4BO75351 RN7SL808P-201ENST00000496066 299 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS4BO75351 AL035404.1-201ENST00000497982 568 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.25□□□□□ -1.57
VPS4BO75351 MYL12BP2-201ENST00000503948 512 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS4BO75351 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS4BO75351 AC073358.1-201ENST00000505671 684 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.25□□□□□ -1.57
VPS4BO75351 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS4BO75351 AC116353.3-201ENST00000511215 249 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS4BO75351 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS4BO75351 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS4BO75351 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS4BO75351 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS4BO75351 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS4BO75351 AC006349.1-201ENST00000555526 235 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.25□□□□□ -1.57
VPS4BO75351 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS4BO75351 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS4BO75351 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS4BO75351 AC135507.1-201ENST00000607214 561 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 AL445222.1-201ENST00000607259 628 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS4BO75351 AL049539.1-201ENST00000611964 459 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS4BO75351 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS4BO75351 AC138965.3-201ENST00000623875 498 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 AC091965.5-201ENST00000624785 342 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS4BO75351 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VPS4BO75351 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS4BO75351 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS4BO75351 AP000526.1-201ENST00000603308 1388 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS4BO75351 SRRM1P3-201ENST00000426911 2678 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS4BO75351 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
VPS4BO75351 AL390862.1-201ENST00000635467 1469 ntBASIC5.25□□□□□ -1.57
VPS4BO75351 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS4BO75351 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS4BO75351 ZNF542P-204ENST00000482727 1305 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
VPS4BO75351 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4BO75351 DDX18P4-201ENST00000511690 1966 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS4BO75351 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS4BO75351 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
VPS4BO75351 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS4BO75351 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4BO75351 OR9G4-201ENST00000302957 984 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 OR56B2P-201ENST00000317102 954 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS4BO75351 RNU6-553P-201ENST00000364047 96 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 RNU6-619P-201ENST00000365146 108 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
VPS4BO75351 Y_RNA.436-201ENST00000384097 102 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 DBIP1-201ENST00000401435 260 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS4BO75351 RBMY2KP-201ENST00000418221 992 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS4BO75351 AL139421.1-201ENST00000423010 169 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 AC019178.2-201ENST00000423595 505 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS4BO75351 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS4BO75351 AL590762.4-201ENST00000425885 253 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 FABP7P2-201ENST00000429946 379 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 MTCO1P54-201ENST00000430139 712 ntBASIC5.24□□□□□ -1.57
VPS4BO75351 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms