Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AL035461.2-201ENST00000619201 524 ntBASIC4.37□□□□□ -1.71
PRKNO60260 AL022393.1-201ENST00000625142 1677 ntBASIC4.37□□□□□ -1.71
PRKNO60260 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PRKNO60260 AL136164.3-201ENST00000624429 3978 ntBASIC4.37□□□□□ -1.71
PRKNO60260 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PRKNO60260 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PRKNO60260 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PRKNO60260 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PRKNO60260 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.37□□□□□ -1.71
PRKNO60260 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PRKNO60260 MFSD8-220ENST00000641243 1422 ntBASIC4.37□□□□□ -1.71
PRKNO60260 AL445487.1-201ENST00000415694 1580 ntBASIC4.36□□□□□ -1.71
PRKNO60260 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.36□□□□□ -1.71
PRKNO60260 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRKNO60260 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRKNO60260 RNU6-452P-201ENST00000384406 107 ntBASIC4.36□□□□□ -1.71
PRKNO60260 RNU6-932P-201ENST00000391108 106 ntBASIC4.36□□□□□ -1.71
PRKNO60260 AC104297.1-201ENST00000393779 870 ntBASIC4.36□□□□□ -1.71
PRKNO60260 MCTS2P-201ENST00000394552 546 ntBASIC4.36□□□□□ -1.71
PRKNO60260 RPS16P5-201ENST00000406501 404 ntBASIC4.36□□□□□ -1.71
PRKNO60260 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.36□□□□□ -1.71
PRKNO60260 U3.35-201ENST00000408405 208 ntBASIC4.36□□□□□ -1.71
PRKNO60260 NPM1P40-201ENST00000412758 733 ntBASIC4.36□□□□□ -1.71
PRKNO60260 RPL7P57-201ENST00000423238 740 ntBASIC4.36□□□□□ -1.71
PRKNO60260 XKRYP1-201ENST00000423438 492 ntBASIC4.36□□□□□ -1.71
PRKNO60260 CKS1BP6-201ENST00000424932 240 ntBASIC4.36□□□□□ -1.71
PRKNO60260 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.36□□□□□ -1.71
PRKNO60260 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.36□□□□□ -1.71
PRKNO60260 CETN4P-201ENST00000432407 469 ntBASIC4.36□□□□□ -1.71
PRKNO60260 XKRYP2-201ENST00000432915 492 ntBASIC4.36□□□□□ -1.71
PRKNO60260 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.36□□□□□ -1.71
PRKNO60260 CEACAMP9-201ENST00000442990 513 ntBASIC4.36□□□□□ -1.71
PRKNO60260 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.36□□□□□ -1.71
PRKNO60260 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.36□□□□□ -1.71
PRKNO60260 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.36□□□□□ -1.71
PRKNO60260 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.36□□□□□ -1.71
PRKNO60260 AC092685.1-201ENST00000447960 1243 ntBASIC4.36□□□□□ -1.71
PRKNO60260 RPL6P9-201ENST00000466502 859 ntBASIC4.36□□□□□ -1.71
PRKNO60260 RN7SL738P-201ENST00000470264 297 ntBASIC4.36□□□□□ -1.71
PRKNO60260 RN7SL459P-201ENST00000481078 302 ntBASIC4.36□□□□□ -1.71
PRKNO60260 MTND4LP2-201ENST00000502312 285 ntBASIC4.36□□□□□ -1.71
PRKNO60260 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.36□□□□□ -1.71
PRKNO60260 AC112673.1-201ENST00000513168 575 ntBASIC4.36□□□□□ -1.71
PRKNO60260 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.36□□□□□ -1.71
PRKNO60260 RNU6-1028P-201ENST00000517164 93 ntBASIC4.36□□□□□ -1.71
PRKNO60260 LRRC6P1-201ENST00000532188 885 ntBASIC4.36□□□□□ -1.71
PRKNO60260 AC090888.2-201ENST00000559765 1144 ntBASIC4.36□□□□□ -1.71
PRKNO60260 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.36□□□□□ -1.71
PRKNO60260 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.36□□□□□ -1.71
PRKNO60260 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.36□□□□□ -1.71
PRKNO60260 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.36□□□□□ -1.71
PRKNO60260 RN7SL52P-201ENST00000584271 284 ntBASIC4.36□□□□□ -1.71
PRKNO60260 AC104785.1-201ENST00000603220 588 ntBASIC4.36□□□□□ -1.71
PRKNO60260 AP002906.1-201ENST00000603405 233 ntBASIC4.36□□□□□ -1.71
PRKNO60260 RN7SL722P-201ENST00000617780 284 ntBASIC4.36□□□□□ -1.71
PRKNO60260 RN7SL565P-201ENST00000618246 284 ntBASIC4.36□□□□□ -1.71
PRKNO60260 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.36□□□□□ -1.71
PRKNO60260 AP000346.3-201ENST00000622821 210 ntBASIC4.36□□□□□ -1.71
PRKNO60260 AC024023.1-201ENST00000624530 922 ntBASIC4.36□□□□□ -1.71
PRKNO60260 AC119674.1-212ENST00000641155 993 ntBASIC4.36□□□□□ -1.71
PRKNO60260 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRKNO60260 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PRKNO60260 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
PRKNO60260 Z98755.1-201ENST00000407015 1384 ntBASIC4.36□□□□□ -1.71
PRKNO60260 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
PRKNO60260 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PRKNO60260 AL034370.1-201ENST00000397254 1590 ntBASIC4.36□□□□□ -1.71
PRKNO60260 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PRKNO60260 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PRKNO60260 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PRKNO60260 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PRKNO60260 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PRKNO60260 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PRKNO60260 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PRKNO60260 AC017079.1-201ENST00000333650 415 ntBASIC4.35□□□□□ -1.71
PRKNO60260 RNU4-31P-201ENST00000384211 141 ntBASIC4.35□□□□□ -1.71
PRKNO60260 TAS2R15P-201ENST00000390674 928 ntBASIC4.35□□□□□ -1.71
PRKNO60260 HMGB3P18-201ENST00000406327 590 ntBASIC4.35□□□□□ -1.71
PRKNO60260 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.35□□□□□ -1.71
PRKNO60260 RNA5SP296-201ENST00000410523 111 ntBASIC4.35□□□□□ -1.71
PRKNO60260 RN7SKP216-201ENST00000411050 312 ntBASIC4.35□□□□□ -1.71
PRKNO60260 SETP15-201ENST00000412724 337 ntBASIC4.35□□□□□ -1.71
PRKNO60260 HMGB3P31-201ENST00000413333 595 ntBASIC4.35□□□□□ -1.71
PRKNO60260 TMBIM7P-201ENST00000418074 855 ntBASIC4.35□□□□□ -1.71
PRKNO60260 AC140479.3-201ENST00000418944 1126 ntBASIC4.35□□□□□ -1.71
PRKNO60260 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.35□□□□□ -1.71
PRKNO60260 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PRKNO60260 OR2AH1P-201ENST00000425717 928 ntBASIC4.35□□□□□ -1.71
PRKNO60260 DPY19L1P2-201ENST00000426647 915 ntBASIC4.35□□□□□ -1.71
PRKNO60260 CACYBPP1-201ENST00000438592 684 ntBASIC4.35□□□□□ -1.71
PRKNO60260 AL138878.2-201ENST00000440581 1241 ntBASIC4.35□□□□□ -1.71
PRKNO60260 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.35□□□□□ -1.71
PRKNO60260 RPL34P26-201ENST00000445636 354 ntBASIC4.35□□□□□ -1.71
PRKNO60260 AC099063.2-201ENST00000446360 662 ntBASIC4.35□□□□□ -1.71
PRKNO60260 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
PRKNO60260 NPM1P39-201ENST00000449818 867 ntBASIC4.35□□□□□ -1.71
PRKNO60260 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PRKNO60260 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.35□□□□□ -1.71
PRKNO60260 AC096992.1-201ENST00000459808 709 ntBASIC4.35□□□□□ -1.71
PRKNO60260 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms