Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
SOX1O00570 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SOX1O00570 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SOX1O00570 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.43□□□□□ -1.38
SOX1O00570 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SOX1O00570 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.43□□□□□ -1.38
SOX1O00570 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SOX1O00570 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.43□□□□□ -1.38
SOX1O00570 BX322650.1-201ENST00000332359 2143 ntBASIC6.43□□□□□ -1.38
SOX1O00570 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.43□□□□□ -1.38
SOX1O00570 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SOX1O00570 AC010168.2-201ENST00000562691 5428 ntBASIC6.43□□□□□ -1.38
SOX1O00570 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SOX1O00570 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SOX1O00570 AC126755.2-208ENST00000327792 462 ntBASIC6.43□□□□□ -1.38
SOX1O00570 AC138969.1-213ENST00000331436 462 ntBASIC6.43□□□□□ -1.38
SOX1O00570 RNU6-1085P-201ENST00000363576 107 ntBASIC6.43□□□□□ -1.38
SOX1O00570 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SOX1O00570 CUBN-201ENST00000377823 705 ntTSL 3 BASIC6.43□□□□□ -1.38
SOX1O00570 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
SOX1O00570 RNU6-483P-201ENST00000384088 108 ntBASIC6.43□□□□□ -1.38
SOX1O00570 RNU6-1103P-201ENST00000384150 107 ntBASIC6.43□□□□□ -1.38
SOX1O00570 RNU6-1122P-201ENST00000384449 107 ntBASIC6.43□□□□□ -1.38
SOX1O00570 AC016739.1-201ENST00000405359 345 ntBASIC6.43□□□□□ -1.38
SOX1O00570 BX295541.1-201ENST00000417774 250 ntBASIC6.43□□□□□ -1.38
SOX1O00570 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.43□□□□□ -1.38
SOX1O00570 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.43□□□□□ -1.38
SOX1O00570 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC6.43□□□□□ -1.38
SOX1O00570 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC6.43□□□□□ -1.38
SOX1O00570 AC092967.1-201ENST00000449016 481 ntBASIC6.43□□□□□ -1.38
SOX1O00570 BX284632.1-201ENST00000478218 541 ntBASIC6.43□□□□□ -1.38
SOX1O00570 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC6.43□□□□□ -1.38
SOX1O00570 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC6.43□□□□□ -1.38
SOX1O00570 PANCR-202ENST00000513690 448 ntTSL 2 BASIC6.43□□□□□ -1.38
SOX1O00570 RNU6-885P-201ENST00000516607 104 ntBASIC6.43□□□□□ -1.38
SOX1O00570 Y_RNA.693-201ENST00000516641 110 ntBASIC6.43□□□□□ -1.38
SOX1O00570 IGKV1D-22-201ENST00000518953 324 ntBASIC6.43□□□□□ -1.38
SOX1O00570 RAB9BP1-201ENST00000519581 626 ntBASIC6.43□□□□□ -1.38
SOX1O00570 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.43□□□□□ -1.38
SOX1O00570 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC6.43□□□□□ -1.38
SOX1O00570 AC022832.1-201ENST00000530718 645 ntBASIC6.43□□□□□ -1.38
SOX1O00570 OR5AN2P-201ENST00000534535 896 ntBASIC6.43□□□□□ -1.38
SOX1O00570 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC6.43□□□□□ -1.38
SOX1O00570 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.43□□□□□ -1.38
SOX1O00570 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC6.43□□□□□ -1.38
SOX1O00570 AC020910.2-201ENST00000603635 610 ntBASIC6.43□□□□□ -1.38
SOX1O00570 AC008745.1-201ENST00000604064 271 ntBASIC6.43□□□□□ -1.38
SOX1O00570 AC243756.2-201ENST00000618406 463 ntBASIC6.43□□□□□ -1.38
SOX1O00570 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SOX1O00570 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SOX1O00570 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SOX1O00570 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SOX1O00570 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SOX1O00570 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.43□□□□□ -1.38
SOX1O00570 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SOX1O00570 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC6.43□□□□□ -1.38
SOX1O00570 AC021242.1-201ENST00000507315 2035 ntBASIC6.43□□□□□ -1.38
SOX1O00570 GDI2P1-201ENST00000429312 1336 ntBASIC6.43□□□□□ -1.38
SOX1O00570 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SOX1O00570 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.43□□□□□ -1.38
SOX1O00570 AC079097.1-201ENST00000512187 1399 ntBASIC6.43□□□□□ -1.38
SOX1O00570 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SOX1O00570 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.42□□□□□ -1.38
SOX1O00570 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
SOX1O00570 MAPK10-287ENST00000641217 3037 ntBASIC6.42□□□□□ -1.38
SOX1O00570 AL139384.2-201ENST00000613809 3590 ntBASIC6.42□□□□□ -1.38
SOX1O00570 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SOX1O00570 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SOX1O00570 AC068870.3-201ENST00000625077 2536 ntBASIC6.42□□□□□ -1.38
SOX1O00570 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SOX1O00570 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
SOX1O00570 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
SOX1O00570 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SOX1O00570 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
SOX1O00570 AL596244.1-201ENST00000567068 3779 ntBASIC6.42□□□□□ -1.38
SOX1O00570 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SOX1O00570 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SOX1O00570 RNU6-582P-201ENST00000362989 107 ntBASIC6.42□□□□□ -1.38
SOX1O00570 RNU6-216P-201ENST00000363282 104 ntBASIC6.42□□□□□ -1.38
SOX1O00570 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
SOX1O00570 U8.14-201ENST00000390843 143 ntBASIC6.42□□□□□ -1.38
SOX1O00570 RN7SKP27-201ENST00000410684 333 ntBASIC6.42□□□□□ -1.38
SOX1O00570 AMD1P2-201ENST00000412936 992 ntBASIC6.42□□□□□ -1.38
SOX1O00570 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SOX1O00570 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.42□□□□□ -1.38
SOX1O00570 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC6.42□□□□□ -1.38
SOX1O00570 AC245028.1-201ENST00000423259 256 ntBASIC6.42□□□□□ -1.38
SOX1O00570 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.42□□□□□ -1.38
SOX1O00570 CYP4F32P-201ENST00000426492 504 ntBASIC6.42□□□□□ -1.38
SOX1O00570 AL358934.1-201ENST00000432346 324 ntBASIC6.42□□□□□ -1.38
SOX1O00570 UBE2V1P5-201ENST00000440070 405 ntBASIC6.42□□□□□ -1.38
SOX1O00570 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC6.42□□□□□ -1.38
SOX1O00570 RPL26P28-201ENST00000451325 435 ntBASIC6.42□□□□□ -1.38
SOX1O00570 RGS5-217ENST00000451759 835 ntTSL 3 BASIC6.42□□□□□ -1.38
SOX1O00570 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.42□□□□□ -1.38
SOX1O00570 RPL7P48-201ENST00000461513 746 ntBASIC6.42□□□□□ -1.38
SOX1O00570 RN7SL481P-201ENST00000477764 299 ntBASIC6.42□□□□□ -1.38
SOX1O00570 AC022215.1-201ENST00000481770 362 ntBASIC6.42□□□□□ -1.38
SOX1O00570 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.42□□□□□ -1.38
SOX1O00570 AC098799.3-201ENST00000506095 438 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms