Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AC004890.1-201ENST00000461005 181 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 RPL7P5-201ENST00000471472 736 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 HMGN2P25-201ENST00000486956 268 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AC005912.1-201ENST00000495392 255 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AC078918.1-201ENST00000498515 228 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 LSM3P4-201ENST00000502948 309 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 HMGB3P15-201ENST00000507326 574 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AC026726.1-201ENST00000512859 601 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 RN7SKP289-201ENST00000517244 295 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AC022790.1-201ENST00000522872 204 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 CYP2C60P-201ENST00000566088 139 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AC010735.1-201ENST00000567305 1026 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AC005951.1-201ENST00000576706 485 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 RN7SL802P-201ENST00000577858 299 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AC022726.1-201ENST00000587475 207 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AC234771.5-201ENST00000600161 514 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AL391358.1-201ENST00000605342 190 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 MIR6731-201ENST00000614863 72 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 CGA-206ENST00000630630 832 ntTSL 2 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AC140479.6-201ENST00000633535 357 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AC011493.1-201ENST00000596753 1632 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AC135352.1-201ENST00000506173 1418 ntBASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC2.23□□□□□ -2.05
CHKB-CPT1BH3BT56 AC010733.2-201ENST00000589496 5702 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AC110792.3-201ENST00000595906 1614 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AMYP1-201ENST00000440059 1023 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 RPS29P31-201ENST00000446147 164 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 KNOP1P3-201ENST00000446933 426 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 NDUFA5P8-201ENST00000449019 346 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AC091179.1-201ENST00000461606 579 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 EIF1P7-201ENST00000487533 337 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AC092349.1-201ENST00000504903 310 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AC091868.1-201ENST00000508746 304 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 GUSBP9-201ENST00000510138 584 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AC027369.2-201ENST00000528030 440 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AC006518.1-201ENST00000541449 943 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AC063950.1-201ENST00000552036 308 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AL121576.1-201ENST00000556055 276 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 MAGOH2P-202ENST00000584384 429 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AC079315.1-201ENST00000602952 623 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AL606490.9-201ENST00000603331 271 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AC005034.4-201ENST00000603612 899 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AC124916.2-201ENST00000604416 224 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AC104662.1-201ENST00000604448 511 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AC010245.2-201ENST00000606908 1167 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AL451074.6-201ENST00000608512 729 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AL359513.1-201ENST00000614364 557 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 AC244100.4-201ENST00000617747 388 ntBASIC2.22□□□□□ -2.05
CHKB-CPT1BH3BT56 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms