Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 AP003392.5-201ENST00000607857 415 ntBASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 AC131238.1-201ENST00000617135 328 ntBASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 AC017007.4-201ENST00000503353 1352 ntBASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 AC012618.3-205ENST00000637896 1496 ntBASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 AL132640.2-201ENST00000559968 1698 ntBASIC4.1□□□□□ -1.75
TRIM49D1C9J1S8 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 NPM1P10-201ENST00000398310 865 ntBASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 UBE2V2P1-201ENST00000434717 398 ntBASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 HMGB3P9-201ENST00000441799 583 ntBASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 AC006011.1-201ENST00000442758 349 ntBASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 YWHAQP9-201ENST00000445891 512 ntBASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 AC017099.1-201ENST00000448261 1028 ntBASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 MTND2P3-201ENST00000452458 470 ntBASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 MTND2P28-201ENST00000457540 1044 ntBASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 RPS29P22-201ENST00000472363 168 ntBASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 AC007688.1-201ENST00000475592 759 ntBASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 MTND1P6-201ENST00000523621 946 ntBASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 AC137768.1-201ENST00000549998 553 ntBASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 AC063949.1-201ENST00000552900 865 ntBASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 AC104785.1-201ENST00000603220 588 ntBASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 AC005229.3-201ENST00000603438 323 ntBASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 AC093765.1-201ENST00000603758 881 ntBASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 AC114878.2-201ENST00000604863 1251 ntBASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 AL451044.1-201ENST00000604867 238 ntBASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 AC117490.2-201ENST00000610042 594 ntBASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 MIR6748-201ENST00000610433 71 ntBASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 MIR6820-201ENST00000611508 62 ntBASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM49D1C9J1S8 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.09□□□□□ -1.76
TRIM49D1C9J1S8 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
TRIM49D1C9J1S8 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 AC010300.1-201ENST00000600671 5134 ntBASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 AC079741.1-201ENST00000321498 212 ntBASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 SNORD35B-201ENST00000363660 87 ntBASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 RPA2P2-201ENST00000419698 796 ntBASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 AC234779.1-201ENST00000425910 285 ntBASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 AC096638.2-201ENST00000434965 711 ntBASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 AF228730.2-201ENST00000438784 848 ntBASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 KCTD9P2-201ENST00000512203 1013 ntBASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 AC090281.1-201ENST00000523019 276 ntBASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 AC107016.1-201ENST00000550463 337 ntBASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 AL137100.1-201ENST00000556703 1620 ntBASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 MRPS35P3-201ENST00000603189 709 ntBASIC4.08□□□□□ -1.76
TRIM49D1C9J1S8 HMGB1P50-201ENST00000605814 607 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms