Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 AC100757.1-201ENST00000616872 1835 ntBASIC6.02□□□□□ -1.45
CTDP1Q9Y5B0 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AC138907.8-201ENST00000623981 2256 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AC093535.2-201ENST00000624769 2326 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 RNA5SP123-201ENST00000363244 119 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 RNU6-192P-201ENST00000391253 100 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AL035419.1-201ENST00000397037 564 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AL121978.1-201ENST00000402778 359 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AL355379.1-201ENST00000405542 640 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AL590084.1-201ENST00000407885 387 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 MIR1182-201ENST00000408363 97 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 RPS7P9-201ENST00000414704 586 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AL354868.1-201ENST00000417077 482 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 DDX39BP1-205ENST00000422507 192 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AC234781.2-201ENST00000426370 994 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 HMGN2P27-201ENST00000427352 270 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AC022022.1-201ENST00000430304 178 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 NDUFB4P8-201ENST00000435351 367 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 PRPF38AP2-201ENST00000438179 851 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 HSFY3P-201ENST00000444242 1191 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 MTND3P7-201ENST00000474435 343 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AC108734.3-201ENST00000481241 1165 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 RN7SL244P-201ENST00000493405 297 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AC119751.1-201ENST00000513357 765 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AC110775.1-201ENST00000513721 462 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AC015688.2-201ENST00000584523 262 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 DEFB131E-202ENST00000602581 683 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 MTCO2P22-201ENST00000603246 681 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AP003392.5-201ENST00000607857 415 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AL354976.1-201ENST00000613843 387 ntBASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CTDP1Q9Y5B0 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 SGO1P1-201ENST00000603525 1447 ntBASIC6□□□□□ -1.45
CTDP1Q9Y5B0 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 AL034403.1-201ENST00000399414 885 ntBASIC6□□□□□ -1.45
CTDP1Q9Y5B0 MTCO1P56-201ENST00000401674 224 ntBASIC6□□□□□ -1.45
CTDP1Q9Y5B0 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 AC011233.1-201ENST00000422812 283 ntBASIC6□□□□□ -1.45
CTDP1Q9Y5B0 ZDHHC20P2-201ENST00000424108 429 ntBASIC6□□□□□ -1.45
CTDP1Q9Y5B0 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 FGF7P5-201ENST00000441829 291 ntBASIC6□□□□□ -1.45
CTDP1Q9Y5B0 RPS27AP8-201ENST00000452665 445 ntBASIC6□□□□□ -1.45
CTDP1Q9Y5B0 CALM1P2-201ENST00000452941 448 ntBASIC6□□□□□ -1.45
CTDP1Q9Y5B0 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 NECAP1P2-201ENST00000455668 727 ntBASIC6□□□□□ -1.45
CTDP1Q9Y5B0 RNU7-125P-201ENST00000458760 62 ntBASIC6□□□□□ -1.45
CTDP1Q9Y5B0 PRELID3BP7-201ENST00000503606 469 ntBASIC6□□□□□ -1.45
CTDP1Q9Y5B0 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 CDH12P4-201ENST00000517835 295 ntBASIC6□□□□□ -1.45
CTDP1Q9Y5B0 CDH12P3-201ENST00000517935 295 ntBASIC6□□□□□ -1.45
CTDP1Q9Y5B0 CDH12P1-201ENST00000518435 295 ntBASIC6□□□□□ -1.45
CTDP1Q9Y5B0 BRD9P1-201ENST00000529855 560 ntBASIC6□□□□□ -1.45
CTDP1Q9Y5B0 OR4A43P-201ENST00000532938 908 ntBASIC6□□□□□ -1.45
CTDP1Q9Y5B0 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6□□□□□ -1.45
CTDP1Q9Y5B0 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms