Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 RPL21P129-201ENST00000491732 478 ntBASIC5.2□□□□□ -1.58
CTNNA3Q9UI47 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.2□□□□□ -1.58
CTNNA3Q9UI47 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CTNNA3Q9UI47 OR8G5-201ENST00000524943 1041 ntBASIC5.2□□□□□ -1.58
CTNNA3Q9UI47 AC100770.1-201ENST00000532310 322 ntBASIC5.2□□□□□ -1.58
CTNNA3Q9UI47 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.2□□□□□ -1.58
CTNNA3Q9UI47 AC023575.1-201ENST00000580510 358 ntBASIC5.2□□□□□ -1.58
CTNNA3Q9UI47 AC008638.3-201ENST00000603341 463 ntBASIC5.2□□□□□ -1.58
CTNNA3Q9UI47 AC010857.1-201ENST00000606398 594 ntBASIC5.2□□□□□ -1.58
CTNNA3Q9UI47 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.2□□□□□ -1.58
CTNNA3Q9UI47 AC011944.2-201ENST00000624440 683 ntBASIC5.2□□□□□ -1.58
CTNNA3Q9UI47 FP325313.1-201ENST00000638228 703 ntBASIC5.2□□□□□ -1.58
CTNNA3Q9UI47 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CTNNA3Q9UI47 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CTNNA3Q9UI47 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CTNNA3Q9UI47 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CTNNA3Q9UI47 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.2□□□□□ -1.58
CTNNA3Q9UI47 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CTNNA3Q9UI47 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CTNNA3Q9UI47 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.2□□□□□ -1.58
CTNNA3Q9UI47 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CTNNA3Q9UI47 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CTNNA3Q9UI47 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 AC110792.3-201ENST00000595906 1614 ntBASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 MIR1911-201ENST00000410783 80 ntBASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 RPL35AP15-201ENST00000468042 339 ntBASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 RPS26P28-201ENST00000470806 348 ntBASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 RPS27AP16-201ENST00000492222 470 ntBASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 HMGB3P13-201ENST00000511263 607 ntBASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 RNA5SP154-201ENST00000516193 111 ntBASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 AC010476.1-201ENST00000519111 851 ntBASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 KPNA2P3-201ENST00000584190 848 ntBASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 AC123786.2-201ENST00000603459 275 ntBASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 AC023043.4-201ENST00000612081 449 ntBASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 AL392048.1-201ENST00000613946 534 ntBASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 AC023509.5-201ENST00000617434 807 ntBASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 IQCB2P-201ENST00000401788 1633 ntBASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 EIF2AP4-201ENST00000424793 1781 ntBASIC5.19□□□□□ -1.58
CTNNA3Q9UI47 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 MAPK10-253ENST00000641010 4072 ntBASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 OR52B1P-201ENST00000316506 909 ntBASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 RNU1-64P-201ENST00000365443 163 ntBASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 MIR23B-201ENST00000384832 97 ntBASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 AC073335.1-201ENST00000427776 363 ntBASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 RPS29P17-201ENST00000430795 166 ntBASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 AL512326.1-201ENST00000443050 721 ntBASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 AC010374.1-201ENST00000503762 1237 ntBASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 AC106806.2-201ENST00000509365 500 ntBASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 AC008694.2-201ENST00000517591 306 ntBASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 PHBP17-201ENST00000528576 541 ntBASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 AC068446.3-201ENST00000555285 382 ntBASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 AC018552.3-201ENST00000567416 561 ntBASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 AL121834.1-201ENST00000572284 509 ntBASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 AC005034.4-201ENST00000603612 899 ntBASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 AC019278.1-201ENST00000623516 479 ntBASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 AC140479.6-201ENST00000633535 357 ntBASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 AL451142.2-201ENST00000429076 2090 ntBASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTNNA3Q9UI47 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 AC105074.1-201ENST00000623380 3095 ntBASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms