Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 RPL12P34-201ENST00000424532 479 ntBASIC3.91□□□□□ -1.78
DUX4Q9UBX2 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 AL606490.7-201ENST00000433136 191 ntBASIC3.91□□□□□ -1.78
DUX4Q9UBX2 AC016831.4-201ENST00000438302 307 ntBASIC3.91□□□□□ -1.78
DUX4Q9UBX2 CEACAMP6-201ENST00000452007 574 ntBASIC3.91□□□□□ -1.78
DUX4Q9UBX2 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 FTH1P2-201ENST00000466086 412 ntBASIC3.91□□□□□ -1.78
DUX4Q9UBX2 RN7SL738P-201ENST00000470264 297 ntBASIC3.91□□□□□ -1.78
DUX4Q9UBX2 RPL23AP71-201ENST00000470966 469 ntBASIC3.91□□□□□ -1.78
DUX4Q9UBX2 AC011005.3-201ENST00000491624 395 ntBASIC3.91□□□□□ -1.78
DUX4Q9UBX2 AC005912.1-201ENST00000495392 255 ntBASIC3.91□□□□□ -1.78
DUX4Q9UBX2 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 RNU6-347P-201ENST00000516658 105 ntBASIC3.91□□□□□ -1.78
DUX4Q9UBX2 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 AC009268.1-201ENST00000561352 1203 ntBASIC3.91□□□□□ -1.78
DUX4Q9UBX2 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 MIR4330-201ENST00000579077 105 ntBASIC3.91□□□□□ -1.78
DUX4Q9UBX2 AC090312.1-201ENST00000580637 348 ntBASIC3.91□□□□□ -1.78
DUX4Q9UBX2 AC090953.1-201ENST00000604305 1092 ntBASIC3.91□□□□□ -1.78
DUX4Q9UBX2 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 OR7A19P-201ENST00000608051 733 ntBASIC3.91□□□□□ -1.78
DUX4Q9UBX2 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 AC135803.1-201ENST00000608748 565 ntBASIC3.91□□□□□ -1.78
DUX4Q9UBX2 AL031666.3-201ENST00000609320 1006 ntBASIC3.91□□□□□ -1.78
DUX4Q9UBX2 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 AL359757.1-201ENST00000623176 255 ntBASIC3.91□□□□□ -1.78
DUX4Q9UBX2 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 AC027287.1-201ENST00000553115 1453 ntBASIC3.91□□□□□ -1.78
DUX4Q9UBX2 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.91□□□□□ -1.78
DUX4Q9UBX2 AC017007.4-201ENST00000503353 1352 ntBASIC3.9□□□□□ -1.78
DUX4Q9UBX2 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
DUX4Q9UBX2 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.9□□□□□ -1.78
DUX4Q9UBX2 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
DUX4Q9UBX2 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
DUX4Q9UBX2 CYP1D1P-201ENST00000416662 1433 ntBASIC3.9□□□□□ -1.78
DUX4Q9UBX2 RNU1-15P-201ENST00000353977 144 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 RNU6-984P-201ENST00000363236 109 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
DUX4Q9UBX2 MIR7-1-201ENST00000384871 110 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 AL138878.1-201ENST00000405131 347 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.9□□□□□ -1.79
DUX4Q9UBX2 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.9□□□□□ -1.79
DUX4Q9UBX2 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.9□□□□□ -1.79
DUX4Q9UBX2 TRGV6-201ENST00000417928 299 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 AC140479.3-201ENST00000418944 1126 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 AC048351.1-201ENST00000420064 602 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 AC069213.2-201ENST00000420238 366 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 CYP4F29P-201ENST00000420685 446 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 USP9YP9-201ENST00000429406 715 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 RPS20P1-201ENST00000434853 354 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 TPTE2P1-204ENST00000435256 593 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 EXTL2P1-201ENST00000446218 416 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 AC239809.1-201ENST00000450470 217 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 APOOP2-201ENST00000461561 539 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 RPS29P22-201ENST00000472363 168 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 RPL36AP41-201ENST00000493820 306 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
DUX4Q9UBX2 AC083829.1-201ENST00000503756 657 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.9□□□□□ -1.79
DUX4Q9UBX2 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.9□□□□□ -1.79
DUX4Q9UBX2 RNU6-491P-201ENST00000516099 110 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 AC104997.1-201ENST00000519761 717 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
DUX4Q9UBX2 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.9□□□□□ -1.79
DUX4Q9UBX2 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.9□□□□□ -1.79
DUX4Q9UBX2 AC068446.3-201ENST00000555285 382 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
DUX4Q9UBX2 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.9□□□□□ -1.79
DUX4Q9UBX2 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.9□□□□□ -1.79
DUX4Q9UBX2 AL161616.1-201ENST00000611867 286 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
DUX4Q9UBX2 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
DUX4Q9UBX2 MIR6810-201ENST00000622701 70 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
DUX4Q9UBX2 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
DUX4Q9UBX2 AC018555.1-201ENST00000567548 1980 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
DUX4Q9UBX2 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
DUX4Q9UBX2 AL627171.1-201ENST00000618845 1308 ntBASIC3.9□□□□□ -1.79
DUX4Q9UBX2 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
DUX4Q9UBX2 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms