Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 AC006499.6-201ENST00000511169 607 ntBASIC3.92□□□□□ -1.78
CCDC88CQ9P219 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 MIR432-201ENST00000606207 94 ntBASIC3.92□□□□□ -1.78
CCDC88CQ9P219 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 AL122126.1-201ENST00000546905 1318 ntBASIC3.92□□□□□ -1.78
CCDC88CQ9P219 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.92□□□□□ -1.78
CCDC88CQ9P219 AC011266.1-201ENST00000624119 3569 ntBASIC3.92□□□□□ -1.78
CCDC88CQ9P219 RN7SKP280-201ENST00000364196 304 ntBASIC3.92□□□□□ -1.78
CCDC88CQ9P219 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 HSPE1P12-201ENST00000412576 301 ntBASIC3.92□□□□□ -1.78
CCDC88CQ9P219 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.92□□□□□ -1.78
CCDC88CQ9P219 MRPL50P1-201ENST00000431951 384 ntBASIC3.92□□□□□ -1.78
CCDC88CQ9P219 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 AC122718.1-201ENST00000439448 744 ntBASIC3.92□□□□□ -1.78
CCDC88CQ9P219 RRM2P4-201ENST00000441721 562 ntBASIC3.92□□□□□ -1.78
CCDC88CQ9P219 AC006011.1-201ENST00000442758 349 ntBASIC3.92□□□□□ -1.78
CCDC88CQ9P219 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 FAM133DP-201ENST00000464802 691 ntBASIC3.92□□□□□ -1.78
CCDC88CQ9P219 AC020593.1-201ENST00000507399 299 ntBASIC3.92□□□□□ -1.78
CCDC88CQ9P219 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 RNA5SP360-201ENST00000516555 118 ntBASIC3.92□□□□□ -1.78
CCDC88CQ9P219 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 AC012417.1-201ENST00000582307 1039 ntBASIC3.92□□□□□ -1.78
CCDC88CQ9P219 AC006133.1-201ENST00000617106 264 ntBASIC3.92□□□□□ -1.78
CCDC88CQ9P219 AC039056.2-201ENST00000622261 511 ntBASIC3.92□□□□□ -1.78
CCDC88CQ9P219 AC012442.3-202ENST00000636742 206 ntBASIC3.92□□□□□ -1.78
CCDC88CQ9P219 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC88CQ9P219 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC88CQ9P219 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC88CQ9P219 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CCDC88CQ9P219 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC88CQ9P219 RLIMP1-201ENST00000339626 1680 ntBASIC3.91□□□□□ -1.78
CCDC88CQ9P219 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC88CQ9P219 RNA5SP388-201ENST00000362584 119 ntBASIC3.91□□□□□ -1.78
CCDC88CQ9P219 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC88CQ9P219 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC88CQ9P219 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC88CQ9P219 MYL12AP1-201ENST00000518490 515 ntBASIC3.91□□□□□ -1.78
CCDC88CQ9P219 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.91□□□□□ -1.78
CCDC88CQ9P219 AC107982.3-201ENST00000584957 985 ntBASIC3.91□□□□□ -1.78
CCDC88CQ9P219 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC88CQ9P219 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.91□□□□□ -1.78
CCDC88CQ9P219 MIR6875-201ENST00000617506 72 ntBASIC3.91□□□□□ -1.78
CCDC88CQ9P219 CDRT1-208ENST00000630868 794 ntBASIC3.91□□□□□ -1.78
CCDC88CQ9P219 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC88CQ9P219 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC88CQ9P219 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC88CQ9P219 XKRY2-202ENST00000623874 1581 ntBASIC3.91□□□□□ -1.78
CCDC88CQ9P219 XKRY-202ENST00000624960 1581 ntBASIC3.91□□□□□ -1.78
CCDC88CQ9P219 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC88CQ9P219 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC88CQ9P219 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC88CQ9P219 MARK2P15-201ENST00000432204 2186 ntBASIC3.91□□□□□ -1.78
CCDC88CQ9P219 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC88CQ9P219 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.9□□□□□ -1.78
CCDC88CQ9P219 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC88CQ9P219 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC88CQ9P219 RNU1-132P-201ENST00000364300 164 ntBASIC3.9□□□□□ -1.78
CCDC88CQ9P219 AMZ2P2-201ENST00000406819 1057 ntBASIC3.9□□□□□ -1.78
CCDC88CQ9P219 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC88CQ9P219 AL500522.2-201ENST00000448562 343 ntBASIC3.9□□□□□ -1.78
CCDC88CQ9P219 SEPT14P1-201ENST00000458703 648 ntBASIC3.9□□□□□ -1.78
CCDC88CQ9P219 AC091959.2-201ENST00000477363 321 ntBASIC3.9□□□□□ -1.78
CCDC88CQ9P219 RPS27AP13-201ENST00000498403 237 ntBASIC3.9□□□□□ -1.78
CCDC88CQ9P219 HPRT1P2-201ENST00000505250 544 ntBASIC3.9□□□□□ -1.78
CCDC88CQ9P219 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.9□□□□□ -1.78
CCDC88CQ9P219 GTF2IP22-201ENST00000554443 182 ntBASIC3.9□□□□□ -1.78
CCDC88CQ9P219 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.9□□□□□ -1.78
CCDC88CQ9P219 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.9□□□□□ -1.78
CCDC88CQ9P219 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
CCDC88CQ9P219 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC88CQ9P219 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
CCDC88CQ9P219 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC88CQ9P219 SNORD74.4-201ENST00000364129 80 ntBASIC3.9□□□□□ -1.79
CCDC88CQ9P219 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC88CQ9P219 TRAV35-201ENST00000390462 330 ntBASIC3.9□□□□□ -1.79
CCDC88CQ9P219 HMGB3P19-201ENST00000403971 560 ntBASIC3.9□□□□□ -1.79
CCDC88CQ9P219 RAB9AP4-201ENST00000415230 609 ntBASIC3.9□□□□□ -1.79
CCDC88CQ9P219 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC88CQ9P219 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC88CQ9P219 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC88CQ9P219 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms