Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
RLIMQ9NVW2 IGBP1P4-201ENST00000503202 879 ntBASIC5.08□□□□□ -1.6
RLIMQ9NVW2 HMGB1P44-201ENST00000508597 572 ntBASIC5.08□□□□□ -1.6
RLIMQ9NVW2 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.08□□□□□ -1.6
RLIMQ9NVW2 LTV1P1-201ENST00000510683 1237 ntBASIC5.08□□□□□ -1.6
RLIMQ9NVW2 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
RLIMQ9NVW2 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.08□□□□□ -1.6
RLIMQ9NVW2 AC106038.2-201ENST00000520706 568 ntBASIC5.08□□□□□ -1.6
RLIMQ9NVW2 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.08□□□□□ -1.6
RLIMQ9NVW2 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.08□□□□□ -1.6
RLIMQ9NVW2 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.08□□□□□ -1.6
RLIMQ9NVW2 AC093519.1-201ENST00000566109 298 ntBASIC5.08□□□□□ -1.6
RLIMQ9NVW2 AC006362.1-201ENST00000567392 174 ntBASIC5.08□□□□□ -1.6
RLIMQ9NVW2 AP005403.1-201ENST00000579720 229 ntBASIC5.08□□□□□ -1.6
RLIMQ9NVW2 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.08□□□□□ -1.6
RLIMQ9NVW2 AC068790.6-201ENST00000602558 258 ntBASIC5.08□□□□□ -1.6
RLIMQ9NVW2 AC074140.1-201ENST00000621617 208 ntBASIC5.08□□□□□ -1.6
RLIMQ9NVW2 AC073869.7-201ENST00000640874 297 ntBASIC5.08□□□□□ -1.6
RLIMQ9NVW2 OR2L1P-202ENST00000641567 1023 ntBASIC5.08□□□□□ -1.6
RLIMQ9NVW2 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RLIMQ9NVW2 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RLIMQ9NVW2 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
RLIMQ9NVW2 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RLIMQ9NVW2 AC073136.1-201ENST00000449426 2884 ntBASIC5.08□□□□□ -1.6
RLIMQ9NVW2 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
RLIMQ9NVW2 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RLIMQ9NVW2 OR9K1P-202ENST00000641111 3217 ntBASIC5.08□□□□□ -1.6
RLIMQ9NVW2 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
RLIMQ9NVW2 CDR1-202ENST00000625883 1485 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 AL512646.1-201ENST00000269395 1077 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 AL672167.1-206ENST00000356293 943 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 SUGT1P1-201ENST00000379514 476 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 MIR92A2-201ENST00000385299 75 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 HMGN1P20-201ENST00000411849 300 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 TPMTP3-201ENST00000411928 735 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 USP9YP33-201ENST00000412220 421 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 AC113412.1-201ENST00000425840 504 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 USP9YP35-201ENST00000435696 412 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 AL353706.1-201ENST00000436728 494 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 FHP1-201ENST00000442741 703 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 AC090804.1-201ENST00000448870 490 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 AL445665.1-202ENST00000452436 324 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 VDAC2P4-201ENST00000452925 711 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 MTCO3P11-201ENST00000455103 774 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 NDUFA5P5-201ENST00000468361 342 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 EIF3KP3-201ENST00000514461 639 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 SNORA48.10-201ENST00000516965 160 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 AC060788.1-201ENST00000521318 469 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 AC079600.1-201ENST00000550326 297 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 MRPS21P7-201ENST00000566937 238 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 AC027243.2-201ENST00000602530 724 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 DEFB131E-202ENST00000602581 683 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 AC015804.1-201ENST00000622935 435 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 AC092656.1-203ENST00000624134 423 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 DBF4P1-201ENST00000412976 1892 ntBASIC5.07□□□□□ -1.6
RLIMQ9NVW2 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RLIMQ9NVW2 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RLIMQ9NVW2 AC092104.1-201ENST00000497346 1441 ntBASIC5.06□□□□□ -1.6
RLIMQ9NVW2 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.06□□□□□ -1.6
RLIMQ9NVW2 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RLIMQ9NVW2 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RLIMQ9NVW2 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
RLIMQ9NVW2 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RLIMQ9NVW2 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RLIMQ9NVW2 U3.4-201ENST00000363352 213 ntBASIC5.06□□□□□ -1.6
RLIMQ9NVW2 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms