Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.28□□□□□ -1.72
CISHQ9NSE2 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.28□□□□□ -1.72
CISHQ9NSE2 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.28□□□□□ -1.72
CISHQ9NSE2 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.28□□□□□ -1.72
CISHQ9NSE2 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.28□□□□□ -1.72
CISHQ9NSE2 MIR4697-201ENST00000582977 78 ntBASIC4.28□□□□□ -1.72
CISHQ9NSE2 AC068020.1-201ENST00000594215 661 ntBASIC4.28□□□□□ -1.72
CISHQ9NSE2 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.28□□□□□ -1.72
CISHQ9NSE2 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.28□□□□□ -1.72
CISHQ9NSE2 AC138627.1-204ENST00000641894 765 ntBASIC4.28□□□□□ -1.72
CISHQ9NSE2 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CISHQ9NSE2 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CISHQ9NSE2 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CISHQ9NSE2 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CISHQ9NSE2 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CISHQ9NSE2 AL929601.4-201ENST00000613011 1341 ntBASIC4.27□□□□□ -1.73
CISHQ9NSE2 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
CISHQ9NSE2 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.27□□□□□ -1.73
CISHQ9NSE2 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CISHQ9NSE2 MIR372-201ENST00000362225 67 ntBASIC4.27□□□□□ -1.73
CISHQ9NSE2 MIR93-201ENST00000385024 80 ntBASIC4.27□□□□□ -1.73
CISHQ9NSE2 AC007068.1-201ENST00000396690 844 ntBASIC4.27□□□□□ -1.73
CISHQ9NSE2 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.27□□□□□ -1.73
CISHQ9NSE2 MIR1251-201ENST00000408552 70 ntBASIC4.27□□□□□ -1.73
CISHQ9NSE2 SNORA3C-201ENST00000408792 125 ntBASIC4.27□□□□□ -1.73
CISHQ9NSE2 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.27□□□□□ -1.73
CISHQ9NSE2 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.27□□□□□ -1.73
CISHQ9NSE2 AL691449.1-201ENST00000426570 421 ntBASIC4.27□□□□□ -1.73
CISHQ9NSE2 AC004975.1-201ENST00000428733 208 ntBASIC4.27□□□□□ -1.73
CISHQ9NSE2 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.27□□□□□ -1.73
CISHQ9NSE2 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.27□□□□□ -1.73
CISHQ9NSE2 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CISHQ9NSE2 VN1R25P-201ENST00000443385 738 ntBASIC4.27□□□□□ -1.73
CISHQ9NSE2 AC073587.1-201ENST00000447093 876 ntBASIC4.27□□□□□ -1.73
CISHQ9NSE2 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.27□□□□□ -1.73
CISHQ9NSE2 VN1R40P-201ENST00000455196 941 ntBASIC4.27□□□□□ -1.73
CISHQ9NSE2 EIF2S2P5-201ENST00000457635 968 ntBASIC4.27□□□□□ -1.73
CISHQ9NSE2 RPL31P61-201ENST00000496160 376 ntBASIC4.27□□□□□ -1.73
CISHQ9NSE2 AC112184.1-201ENST00000505179 312 ntBASIC4.27□□□□□ -1.73
CISHQ9NSE2 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.27□□□□□ -1.73
CISHQ9NSE2 IGHV3-63-201ENST00000518422 341 ntBASIC4.27□□□□□ -1.73
CISHQ9NSE2 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.27□□□□□ -1.73
CISHQ9NSE2 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.27□□□□□ -1.73
CISHQ9NSE2 AC091516.1-201ENST00000549191 703 ntBASIC4.27□□□□□ -1.73
CISHQ9NSE2 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.27□□□□□ -1.73
CISHQ9NSE2 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.27□□□□□ -1.73
CISHQ9NSE2 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.27□□□□□ -1.73
CISHQ9NSE2 AP000255.1-201ENST00000610276 676 ntBASIC4.27□□□□□ -1.73
CISHQ9NSE2 AC124312.6-202ENST00000623624 418 ntBASIC4.27□□□□□ -1.73
CISHQ9NSE2 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.27□□□□□ -1.73
CISHQ9NSE2 RNA5SP196-201ENST00000625967 102 ntBASIC4.27□□□□□ -1.73
CISHQ9NSE2 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CISHQ9NSE2 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CISHQ9NSE2 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.27□□□□□ -1.73
CISHQ9NSE2 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CISHQ9NSE2 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.27□□□□□ -1.73
CISHQ9NSE2 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CISHQ9NSE2 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CISHQ9NSE2 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CISHQ9NSE2 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CISHQ9NSE2 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CISHQ9NSE2 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CISHQ9NSE2 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CISHQ9NSE2 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CISHQ9NSE2 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CISHQ9NSE2 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CISHQ9NSE2 RNA5SP399-201ENST00000364003 117 ntBASIC4.26□□□□□ -1.73
CISHQ9NSE2 RN7SKP247-201ENST00000411094 308 ntBASIC4.26□□□□□ -1.73
CISHQ9NSE2 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 YY1P1-201ENST00000427625 668 ntBASIC4.26□□□□□ -1.73
CISHQ9NSE2 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 AC006326.1-201ENST00000445465 787 ntBASIC4.26□□□□□ -1.73
CISHQ9NSE2 AL589765.3-201ENST00000446084 462 ntBASIC4.26□□□□□ -1.73
CISHQ9NSE2 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 NUTF2P7-201ENST00000453086 375 ntBASIC4.26□□□□□ -1.73
CISHQ9NSE2 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CISHQ9NSE2 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 AC108064.1-201ENST00000513791 460 ntBASIC4.26□□□□□ -1.73
CISHQ9NSE2 RFPL4AP3-201ENST00000515267 345 ntBASIC4.26□□□□□ -1.73
CISHQ9NSE2 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 GNRHR2P1-201ENST00000555315 631 ntBASIC4.26□□□□□ -1.73
CISHQ9NSE2 AC084759.1-201ENST00000561168 290 ntBASIC4.26□□□□□ -1.73
CISHQ9NSE2 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.26□□□□□ -1.73
CISHQ9NSE2 ZYXP1-201ENST00000617638 118 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms