Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SEPT14P19-203ENST00000633205 211 ntBASIC6.14□□□□□ -1.43
PDLIM7Q9NR12 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
PDLIM7Q9NR12 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM7Q9NR12 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM7Q9NR12 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM7Q9NR12 OR4F13P-202ENST00000560066 2054 ntBASIC6.14□□□□□ -1.43
PDLIM7Q9NR12 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM7Q9NR12 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PDLIM7Q9NR12 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM7Q9NR12 AC012618.3-205ENST00000637896 1496 ntBASIC6.14□□□□□ -1.43
PDLIM7Q9NR12 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM7Q9NR12 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM7Q9NR12 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.14□□□□□ -1.43
PDLIM7Q9NR12 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PDLIM7Q9NR12 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.14□□□□□ -1.43
PDLIM7Q9NR12 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.14□□□□□ -1.43
PDLIM7Q9NR12 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDLIM7Q9NR12 CR848007.1-201ENST00000442354 1699 ntBASIC6.14□□□□□ -1.43
PDLIM7Q9NR12 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AC018809.2-201ENST00000602436 3823 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 SNORA75-201ENST00000384158 137 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 SNORA16A-201ENST00000384342 137 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 MIR548F1-201ENST00000408667 84 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 RNA5SP80-201ENST00000410475 111 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 RNU2-66P-201ENST00000410650 161 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AC007435.1-201ENST00000421086 415 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 OFD1P2Y-201ENST00000421895 1149 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 MGAT2P2-201ENST00000427194 797 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AC104837.2-201ENST00000427236 424 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 VDAC1P6-201ENST00000430062 855 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 TMEM183AP1-205ENST00000432739 290 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 TRIM60P18-201ENST00000441518 828 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 TPT1P13-201ENST00000449760 499 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 RHEBP2-201ENST00000450289 600 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 RPL36AP33-201ENST00000450395 310 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AC079776.3-201ENST00000450665 370 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 SNRPGP9-201ENST00000456025 225 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AC109445.1-201ENST00000512356 383 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 SMARCE1P4-201ENST00000523647 241 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AC122688.1-201ENST00000541494 223 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 H3F3BP2-201ENST00000583907 357 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AC008507.1-201ENST00000587506 734 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AC083760.1-201ENST00000589621 670 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AC069307.1-201ENST00000602820 447 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AC087783.2-201ENST00000605070 562 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 NDUFA8P1-201ENST00000605525 367 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AC025594.3-201ENST00000613068 790 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AC015712.7-201ENST00000615211 635 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AC135068.5-201ENST00000624197 983 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AC024023.1-201ENST00000624530 922 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AL353662.3-201ENST00000625131 237 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 MTND4P31-201ENST00000425607 1343 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 PANDAR-201ENST00000629595 1506 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AC020633.1-201ENST00000468439 2247 ntBASIC6.13□□□□□ -1.43
PDLIM7Q9NR12 AP000547.3-204ENST00000588548 2523 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms