Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 AC004938.1-201ENST00000438468 308 ntBASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 SCARNA10-201ENST00000459255 330 ntBASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 AC011037.1-201ENST00000483964 558 ntBASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 RPL21P7-201ENST00000557463 483 ntBASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 AC087477.6-201ENST00000559595 843 ntBASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 BNIP3P5-201ENST00000562290 498 ntBASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 MIR3160-1-201ENST00000577972 85 ntBASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 HMGB2P1-201ENST00000591146 634 ntBASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 AC010680.3-201ENST00000604215 520 ntBASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 AC010857.1-201ENST00000606398 594 ntBASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 AC091979.2-201ENST00000607514 214 ntBASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 AC107905.1-201ENST00000616204 426 ntBASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 AC234782.5-201ENST00000617723 324 ntBASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 AC009452.1-201ENST00000640823 606 ntBASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 AL031119.1-201ENST00000404707 1879 ntBASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 AC010300.1-201ENST00000600671 5134 ntBASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TM9SF3Q9HD45 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 AC125257.1-201ENST00000560400 2930 ntBASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 RNA5SP372-201ENST00000390836 115 ntBASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 FTH1P16-201ENST00000435241 552 ntBASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 EEF1A1P1-201ENST00000447052 739 ntBASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 RN7SL303P-201ENST00000469773 251 ntBASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 AC108120.2-201ENST00000512973 294 ntBASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 OR8G5-201ENST00000524943 1041 ntBASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 VN1R84P-201ENST00000593697 235 ntBASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 AP004372.1-201ENST00000604842 844 ntBASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TM9SF3Q9HD45 AC015813.6-201ENST00000624409 5808 ntBASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 RNU6-670P-201ENST00000364312 104 ntBASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 RNA5SP515-201ENST00000364570 118 ntBASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 OR2X1P-201ENST00000421144 687 ntBASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 AC007563.3-201ENST00000433233 371 ntBASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 NDUFS5P3-201ENST00000450668 321 ntBASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 RN7SL817P-201ENST00000480777 288 ntBASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 PRELID3BP7-201ENST00000503606 469 ntBASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 AP000827.1-201ENST00000527814 258 ntBASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 ARF4P1-201ENST00000605447 541 ntBASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 AL355816.1-201ENST00000607951 118 ntBASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 AC243654.2-201ENST00000612843 443 ntBASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 AC114781.5-201ENST00000615297 108 ntBASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 AC140113.4-201ENST00000622087 222 ntBASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 AC116563.2-201ENST00000624751 535 ntBASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 AC092435.4-201ENST00000623012 4159 ntBASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.55□□□□□ -1.68
TM9SF3Q9HD45 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms