Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RNU4-76P-201ENST00000364509 141 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
VPS11Q9H270 XGY1-201ENST00000381172 446 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 RNU6-549P-201ENST00000384433 107 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS11Q9H270 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS11Q9H270 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS11Q9H270 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS11Q9H270 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS11Q9H270 BX284632.2-201ENST00000421091 399 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 OR5AW1P-201ENST00000426334 1006 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 MTCO2P11-201ENST00000431069 680 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
VPS11Q9H270 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS11Q9H270 NDUFS5P5-201ENST00000437256 321 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 AL512605.1-202ENST00000441919 381 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 AL359955.2-201ENST00000445380 353 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 CDC27P1-201ENST00000445384 715 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS11Q9H270 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS11Q9H270 MRPL42P4-201ENST00000453267 443 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 RPL10P17-201ENST00000453852 316 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 AZGP1P2-201ENST00000454506 345 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 RANP1-206ENST00000455094 651 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS11Q9H270 UBFD1P1-201ENST00000473259 814 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 AC079203.1-201ENST00000487972 404 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 MYL12BP2-201ENST00000503948 512 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS11Q9H270 AC004069.2-201ENST00000505438 1114 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VPS11Q9H270 MTND2P33-201ENST00000506452 1031 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 PRDX4P1-201ENST00000507189 574 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS11Q9H270 OR5H4P-201ENST00000510851 923 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 AC091912.1-201ENST00000511351 248 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 AC021678.3-201ENST00000517893 476 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS11Q9H270 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.6□□□□□ -1.51
VPS11Q9H270 PMS2P3-207ENST00000529061 717 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
VPS11Q9H270 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS11Q9H270 GLYCAM1-201ENST00000546596 285 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS11Q9H270 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
VPS11Q9H270 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS11Q9H270 AC007956.1-201ENST00000555623 542 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS11Q9H270 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS11Q9H270 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS11Q9H270 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS11Q9H270 MTND1P15-201ENST00000579262 949 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
VPS11Q9H270 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS11Q9H270 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS11Q9H270 AP001269.3-201ENST00000588718 329 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS11Q9H270 AL121757.2-201ENST00000611223 313 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 MIR6889-201ENST00000613185 59 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS11Q9H270 AL121890.2-201ENST00000617644 465 ntBASIC5.6□□□□□ -1.51
VPS11Q9H270 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VPS11Q9H270 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
VPS11Q9H270 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VPS11Q9H270 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS11Q9H270 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS11Q9H270 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
VPS11Q9H270 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS11Q9H270 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS11Q9H270 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS11Q9H270 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS11Q9H270 MTND5P17-201ENST00000418405 1603 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
VPS11Q9H270 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
VPS11Q9H270 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.59□□□□□ -1.51
VPS11Q9H270 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.59□□□□□ -1.51
VPS11Q9H270 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
VPS11Q9H270 AC104966.1-201ENST00000467010 1464 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.59□□□□□ -1.51
VPS11Q9H270 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VPS11Q9H270 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VPS11Q9H270 OR9K1P-202ENST00000641111 3217 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS11Q9H270 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
VPS11Q9H270 Y_RNA.61-201ENST00000362835 102 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 RNA5SP500-201ENST00000364486 119 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS11Q9H270 Y_RNA.560-201ENST00000384689 102 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 RNU6-114P-201ENST00000384704 105 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 MIR525-201ENST00000384978 85 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 MT-TH-201ENST00000387441 69 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 SNORA48.4-201ENST00000391089 134 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VPS11Q9H270 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VPS11Q9H270 ATP5F1P4-201ENST00000397288 746 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC5.59□□□□□ -1.51
VPS11Q9H270 RPS27AP7-201ENST00000422792 455 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS11Q9H270 AP001324.1-201ENST00000428553 399 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms