Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 AC034114.1-201ENST00000520293 285 ntBASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 AC100870.1-201ENST00000522035 505 ntBASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 IGHVIII-82-201ENST00000522058 250 ntBASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 WBP1LP3-201ENST00000523033 208 ntBASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 LINC02403-201ENST00000548215 484 ntTSL 3 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 PCED1B-AS1-206ENST00000550426 683 ntTSL 5 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 PCED1B-AS1-211ENST00000552990 654 ntTSL 3 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 CCDC32-212ENST00000560305 557 ntTSL 4 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 ARPP19-213ENST00000569723 550 ntTSL 4 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 MIR4437-201ENST00000581331 60 ntBASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 AC067796.1-201ENST00000586795 496 ntBASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 ZNF677-208ENST00000599012 796 ntTSL 3 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 AC010900.2-201ENST00000604508 210 ntBASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 CR382285.1-202ENST00000604687 547 ntBASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 AL158032.1-201ENST00000605401 106 ntBASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 AC006023.2-201ENST00000609916 167 ntBASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 AL133351.5-201ENST00000612789 106 ntBASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 MIR6741-201ENST00000618782 63 ntBASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 AL512652.1-201ENST00000619006 500 ntBASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 RN7SL113P-201ENST00000619959 299 ntBASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 MED15P6-202ENST00000621415 787 ntBASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 AL161637.1-201ENST00000622380 412 ntBASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 AP001784.1-201ENST00000624107 428 ntBASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 LINC01620-205ENST00000637248 546 ntTSL 4 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 AL122126.1-201ENST00000546905 1318 ntBASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 MEST-203ENST00000378576 2180 ntTSL 5 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC3.92□□□□□ -1.78
KRTAP3-1Q9BYR8 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 EIF4ENIF1-201ENST00000330125 3544 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 Y_RNA.84-201ENST00000363011 104 ntBASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 RNY1P16-201ENST00000363063 111 ntBASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 AC093392.1-201ENST00000366280 340 ntBASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 RNA5SP185-201ENST00000390963 114 ntBASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 MRPL35P1-201ENST00000404272 572 ntBASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 MIR1306-201ENST00000408439 85 ntBASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 SNORD3J-201ENST00000408473 190 ntBASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 PGAM1P3-201ENST00000420790 565 ntBASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 UBE2D3P2-201ENST00000424409 445 ntBASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 MYL6BP1-201ENST00000429485 615 ntBASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 RPSAP65-201ENST00000429660 595 ntBASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 GHRL-207ENST00000437422 443 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 AC005077.3-202ENST00000437494 300 ntTSL 3 BASIC3.91□□□□□ -1.78
KRTAP3-1Q9BYR8 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms