Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 RHOT1P2-201ENST00000366423 333 ntBASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 MT-RNR1-201ENST00000389680 954 ntBASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 RNU6-628P-201ENST00000410675 107 ntBASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 RBMY1KP-201ENST00000423480 476 ntBASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 RPL5P32-201ENST00000454085 879 ntBASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 SEPT14P1-201ENST00000458703 648 ntBASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 AC010469.1-201ENST00000463864 576 ntBASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 PGBD4P4-201ENST00000509673 613 ntBASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 NDUFB4P12-201ENST00000513465 390 ntBASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 RNA5SP519-201ENST00000516480 119 ntBASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 PHBP17-201ENST00000528576 541 ntBASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 AC006064.5-201ENST00000541782 248 ntBASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 RN7SL703P-201ENST00000578485 302 ntBASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 AC008638.3-201ENST00000603341 463 ntBASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 AC096586.2-201ENST00000610260 441 ntBASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 AC009237.17-201ENST00000618111 748 ntBASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RPAP1Q9BWH6 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 AC005332.5-201ENST00000591222 2919 ntBASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 AC233968.1-201ENST00000611212 1300 ntBASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 RNU1-15P-201ENST00000353977 144 ntBASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 RN7SKP235-201ENST00000410662 305 ntBASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 RRM2P4-201ENST00000441721 562 ntBASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 AC006326.1-201ENST00000445465 787 ntBASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 RPL5P30-201ENST00000465511 891 ntBASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 MTCO1P49-201ENST00000523429 802 ntBASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 CYP4A43P-201ENST00000568156 121 ntBASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RPAP1Q9BWH6 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 NAMPTP1-201ENST00000440465 2514 ntBASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 CR382285.2-201ENST00000624662 1495 ntBASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 CYP1D1P-201ENST00000416662 1433 ntBASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 OR52B1P-201ENST00000316506 909 ntBASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 RNA5SP283-201ENST00000365604 119 ntBASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 MIR513A2-201ENST00000385249 127 ntBASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 RNA5SP171-201ENST00000391071 115 ntBASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 YY1P1-201ENST00000427625 668 ntBASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 AL117339.2-201ENST00000430475 180 ntBASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 COX6B1P7-201ENST00000430845 235 ntBASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 CEACAMP1-201ENST00000434624 1035 ntBASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 AL591363.1-201ENST00000450091 483 ntBASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 RNA5SP246-201ENST00000458909 119 ntBASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 snoU13.22-201ENST00000459428 104 ntBASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.12□□□□□ -1.59
RPAP1Q9BWH6 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms