Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 LCN1P2-201ENST00000372030 223 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 RNU6-517P-201ENST00000384362 110 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 RNU6-769P-201ENST00000384407 104 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 AP003170.5-201ENST00000397185 335 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 RNU6ATAC25P-201ENST00000408798 117 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 AL357752.1-201ENST00000412817 349 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 RPL31P2-201ENST00000413849 377 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 HMGB3P23-201ENST00000414981 585 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 AL133325.1-201ENST00000421090 382 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 AC115283.1-201ENST00000427353 400 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 AC010975.2-201ENST00000427781 588 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 PSMA2P3-201ENST00000429685 675 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 AL389925.1-201ENST00000432257 728 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 EIF5AP4-201ENST00000441206 465 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 GDI2P2-201ENST00000445131 608 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 AC004980.3-201ENST00000447046 365 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 BX276092.4-201ENST00000452056 248 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 PPIAP7-201ENST00000454070 489 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 KCTD9P2-201ENST00000512203 1013 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 AP000620.1-201ENST00000527147 504 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 TRIM51DP-201ENST00000529746 596 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 PTP4A1P6-201ENST00000531034 478 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 MAL2-203ENST00000534619 578 ntTSL 4 BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 AC007956.1-201ENST00000555623 542 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 MTATP6P3-201ENST00000581686 676 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 AP003465.2-201ENST00000602571 373 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 AC091965.4-201ENST00000607691 587 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 AC015982.1-201ENST00000608113 465 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 AC103710.1-201ENST00000610003 901 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 U6atac.1-201ENST00000616025 117 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 AC091932.2-201ENST00000623014 291 ntBASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
TRAIPQ9BWF2 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 KPNA2P2-201ENST00000419546 1489 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AP002001.2-201ENST00000529025 1469 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 RNA5SP110-201ENST00000362638 115 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 SNORA70H-201ENST00000383910 135 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 SNORA70J-201ENST00000384182 135 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 RPL31P1-201ENST00000398116 372 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 RPL31P45-201ENST00000419532 356 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 RPL12P12-201ENST00000424633 501 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AC130360.1-201ENST00000425489 1117 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 RPL12P16-201ENST00000431098 498 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 MTATP6P13-201ENST00000438531 667 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 SDCBPP1-201ENST00000440192 890 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 NOP56P2-201ENST00000447491 769 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 VDAC2P4-201ENST00000452925 711 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 KLF3P2-201ENST00000465138 268 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 TMED11P-201ENST00000479478 690 ntBASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRAIPQ9BWF2 NDUFB4P2-201ENST00000509515 391 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms