Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.28□□□□□ -1.56
ABCA3Q99758 AL513548.1-201ENST00000562904 1724 ntBASIC5.28□□□□□ -1.56
ABCA3Q99758 AL137849.1-201ENST00000604767 169 ntBASIC5.28□□□□□ -1.56
ABCA3Q99758 MIR7702-201ENST00000621931 59 ntBASIC5.28□□□□□ -1.56
ABCA3Q99758 AC243312.2-201ENST00000623340 601 ntBASIC5.28□□□□□ -1.56
ABCA3Q99758 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.28□□□□□ -1.56
ABCA3Q99758 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.28□□□□□ -1.56
ABCA3Q99758 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
ABCA3Q99758 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
ABCA3Q99758 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.27□□□□□ -1.57
ABCA3Q99758 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.27□□□□□ -1.57
ABCA3Q99758 AL591419.1-201ENST00000427423 339 ntBASIC5.27□□□□□ -1.57
ABCA3Q99758 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ABCA3Q99758 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.27□□□□□ -1.57
ABCA3Q99758 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.27□□□□□ -1.57
ABCA3Q99758 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC5.27□□□□□ -1.57
ABCA3Q99758 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.27□□□□□ -1.57
ABCA3Q99758 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.27□□□□□ -1.57
ABCA3Q99758 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.27□□□□□ -1.57
ABCA3Q99758 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.27□□□□□ -1.57
ABCA3Q99758 AC063950.1-201ENST00000552036 308 ntBASIC5.27□□□□□ -1.57
ABCA3Q99758 AL451044.1-201ENST00000604867 238 ntBASIC5.27□□□□□ -1.57
ABCA3Q99758 AC011816.2-201ENST00000607089 556 ntBASIC5.27□□□□□ -1.57
ABCA3Q99758 MIR8058-201ENST00000615737 89 ntBASIC5.27□□□□□ -1.57
ABCA3Q99758 AL138721.1-201ENST00000616756 179 ntBASIC5.27□□□□□ -1.57
ABCA3Q99758 AP005264.7-201ENST00000625003 745 ntBASIC5.27□□□□□ -1.57
ABCA3Q99758 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.27□□□□□ -1.57
ABCA3Q99758 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ABCA3Q99758 EOGT-210ENST00000615922 1931 ntBASIC5.27□□□□□ -1.57
ABCA3Q99758 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
ABCA3Q99758 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
ABCA3Q99758 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
ABCA3Q99758 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
ABCA3Q99758 SNORD96B-201ENST00000386148 79 ntBASIC5.26□□□□□ -1.57
ABCA3Q99758 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
ABCA3Q99758 HIST1H2APS3-201ENST00000403259 134 ntBASIC5.26□□□□□ -1.57
ABCA3Q99758 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.26□□□□□ -1.57
ABCA3Q99758 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.26□□□□□ -1.57
ABCA3Q99758 RNU7-143P-201ENST00000516781 65 ntBASIC5.26□□□□□ -1.57
ABCA3Q99758 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ABCA3Q99758 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.26□□□□□ -1.57
ABCA3Q99758 GTF2IP8-201ENST00000560687 584 ntBASIC5.26□□□□□ -1.57
ABCA3Q99758 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
ABCA3Q99758 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.26□□□□□ -1.57
ABCA3Q99758 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
ABCA3Q99758 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ABCA3Q99758 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ABCA3Q99758 NAMPTP1-201ENST00000440465 2514 ntBASIC5.26□□□□□ -1.57
ABCA3Q99758 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.26□□□□□ -1.57
ABCA3Q99758 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
ABCA3Q99758 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.26□□□□□ -1.57
ABCA3Q99758 AC010266.2-201ENST00000564741 3255 ntBASIC5.26□□□□□ -1.57
ABCA3Q99758 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.26□□□□□ -1.57
ABCA3Q99758 MIR199A2-201ENST00000385289 110 ntBASIC5.26□□□□□ -1.57
ABCA3Q99758 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.26□□□□□ -1.57
ABCA3Q99758 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.26□□□□□ -1.57
ABCA3Q99758 CYCSP4-201ENST00000429682 331 ntBASIC5.26□□□□□ -1.57
ABCA3Q99758 RPL21P23-201ENST00000446654 460 ntBASIC5.26□□□□□ -1.57
ABCA3Q99758 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.26□□□□□ -1.57
ABCA3Q99758 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.26□□□□□ -1.57
ABCA3Q99758 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ABCA3Q99758 CYCSP28-201ENST00000534284 321 ntBASIC5.26□□□□□ -1.57
ABCA3Q99758 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.26□□□□□ -1.57
ABCA3Q99758 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.26□□□□□ -1.57
ABCA3Q99758 AC020914.6-201ENST00000594327 272 ntBASIC5.26□□□□□ -1.57
ABCA3Q99758 AC104662.1-201ENST00000604448 511 ntBASIC5.26□□□□□ -1.57
ABCA3Q99758 AL157762.1-201ENST00000619612 415 ntBASIC5.26□□□□□ -1.57
ABCA3Q99758 AC019278.1-201ENST00000623516 479 ntBASIC5.26□□□□□ -1.57
ABCA3Q99758 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.25□□□□□ -1.57
ABCA3Q99758 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
ABCA3Q99758 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
ABCA3Q99758 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ABCA3Q99758 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC5.25□□□□□ -1.57
ABCA3Q99758 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
ABCA3Q99758 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.25□□□□□ -1.57
ABCA3Q99758 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
ABCA3Q99758 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ABCA3Q99758 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
ABCA3Q99758 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC5.25□□□□□ -1.57
ABCA3Q99758 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
ABCA3Q99758 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
ABCA3Q99758 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ABCA3Q99758 MTND2P15-201ENST00000418575 892 ntBASIC5.25□□□□□ -1.57
ABCA3Q99758 RPL6P9-201ENST00000466502 859 ntBASIC5.25□□□□□ -1.57
ABCA3Q99758 PHBP17-201ENST00000528576 541 ntBASIC5.25□□□□□ -1.57
ABCA3Q99758 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.25□□□□□ -1.57
ABCA3Q99758 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.25□□□□□ -1.57
ABCA3Q99758 AC012493.2-201ENST00000595083 291 ntBASIC5.25□□□□□ -1.57
ABCA3Q99758 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.25□□□□□ -1.57
ABCA3Q99758 AC005086.4-201ENST00000623065 213 ntBASIC5.25□□□□□ -1.57
ABCA3Q99758 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.25□□□□□ -1.57
ABCA3Q99758 AP002512.4-202ENST00000641599 4530 ntBASIC5.25□□□□□ -1.57
ABCA3Q99758 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
ABCA3Q99758 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
ABCA3Q99758 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
ABCA3Q99758 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
ABCA3Q99758 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC5.24□□□□□ -1.57
ABCA3Q99758 RNU1-33P-201ENST00000364249 162 ntBASIC5.24□□□□□ -1.57
ABCA3Q99758 RNU6-316P-201ENST00000391027 107 ntBASIC5.24□□□□□ -1.57
ABCA3Q99758 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms