Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 SNORA38.1-201ENST00000364172 131 ntBASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 AL049844.2-201ENST00000604280 628 ntBASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 AC243654.2-201ENST00000612843 443 ntBASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 AC138932.5-201ENST00000617759 563 ntBASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 SNORA3C-201ENST00000408792 125 ntBASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 AC005726.1-201ENST00000494679 427 ntBASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 RNA5SP179-201ENST00000517284 121 ntBASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 CR383656.14-201ENST00000551951 406 ntBASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 AC091167.4-201ENST00000605079 184 ntBASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 AC005086.4-201ENST00000623065 213 ntBASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 AC010285.3-201ENST00000511668 676 ntBASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 HSFY4P-201ENST00000415994 1181 ntBASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 ZYG11AP1-201ENST00000430329 837 ntBASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 CYCSP35-201ENST00000451978 304 ntBASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 RNA5SP497-201ENST00000516081 97 ntBASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 AC006077.1-201ENST00000604746 343 ntBASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 AF001550.2-201ENST00000636643 217 ntBASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 LINC01109-201ENST00000603837 3081 ntBASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 AC239868.2-201ENST00000564237 4527 ntBASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 XGY1-201ENST00000381172 446 ntBASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 AL358178.1-201ENST00000407698 397 ntBASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 AC093815.1-201ENST00000508637 280 ntBASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 MIR7106-201ENST00000612419 65 ntBASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 AP001153.1-201ENST00000641024 338 ntBASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CSMD1Q96PZ7 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 RNA5SP120-201ENST00000410900 112 ntBASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 AC083863.1-201ENST00000438811 231 ntBASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 Z75741.1-201ENST00000446793 314 ntBASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 Y_RNA.638-201ENST00000459374 113 ntBASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 AC124068.1-201ENST00000563131 678 ntBASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 OR10J6P-201ENST00000289731 930 ntBASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 RNA5SP187-201ENST00000384400 119 ntBASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 RPL21P13-201ENST00000488305 481 ntBASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 RN7SL504P-201ENST00000494496 287 ntBASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 AC022655.2-201ENST00000577280 318 ntBASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
CSMD1Q96PZ7 AL353743.1-202ENST00000431724 1695 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms