Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
USP47Q96K76 NPM1P41-201ENST00000512920 831 ntBASIC5.67□□□□□ -1.5
USP47Q96K76 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.67□□□□□ -1.5
USP47Q96K76 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USP47Q96K76 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.67□□□□□ -1.5
USP47Q96K76 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.67□□□□□ -1.5
USP47Q96K76 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USP47Q96K76 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.67□□□□□ -1.5
USP47Q96K76 AC025627.2-201ENST00000576220 160 ntBASIC5.67□□□□□ -1.5
USP47Q96K76 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.67□□□□□ -1.5
USP47Q96K76 AC104662.1-201ENST00000604448 511 ntBASIC5.67□□□□□ -1.5
USP47Q96K76 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
USP47Q96K76 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.67□□□□□ -1.5
USP47Q96K76 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP47Q96K76 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.67□□□□□ -1.5
USP47Q96K76 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.67□□□□□ -1.5
USP47Q96K76 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.67□□□□□ -1.5
USP47Q96K76 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP47Q96K76 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.67□□□□□ -1.5
USP47Q96K76 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USP47Q96K76 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
USP47Q96K76 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP47Q96K76 RPL17P50-201ENST00000396131 546 ntBASIC5.67□□□□□ -1.5
USP47Q96K76 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.67□□□□□ -1.5
USP47Q96K76 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.67□□□□□ -1.5
USP47Q96K76 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.67□□□□□ -1.5
USP47Q96K76 RPS29P7-201ENST00000439662 171 ntBASIC5.67□□□□□ -1.5
USP47Q96K76 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.67□□□□□ -1.5
USP47Q96K76 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.67□□□□□ -1.5
USP47Q96K76 AC017037.1-201ENST00000508460 471 ntBASIC5.67□□□□□ -1.5
USP47Q96K76 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.67□□□□□ -1.5
USP47Q96K76 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.67□□□□□ -1.5
USP47Q96K76 AC012417.1-201ENST00000582307 1039 ntBASIC5.67□□□□□ -1.5
USP47Q96K76 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.67□□□□□ -1.5
USP47Q96K76 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USP47Q96K76 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.66□□□□□ -1.5
USP47Q96K76 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USP47Q96K76 MIR208A-201ENST00000362287 71 ntBASIC5.66□□□□□ -1.5
USP47Q96K76 SNORA11.1-201ENST00000408133 129 ntBASIC5.66□□□□□ -1.5
USP47Q96K76 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.66□□□□□ -1.5
USP47Q96K76 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.66□□□□□ -1.5
USP47Q96K76 AC007389.2-201ENST00000434630 306 ntBASIC5.66□□□□□ -1.5
USP47Q96K76 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.66□□□□□ -1.5
USP47Q96K76 AC083863.1-201ENST00000438811 231 ntBASIC5.66□□□□□ -1.5
USP47Q96K76 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.66□□□□□ -1.5
USP47Q96K76 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.66□□□□□ -1.5
USP47Q96K76 AP005901.4-201ENST00000577336 569 ntBASIC5.66□□□□□ -1.5
USP47Q96K76 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.66□□□□□ -1.5
USP47Q96K76 AL773545.4-201ENST00000637262 310 ntBASIC5.66□□□□□ -1.5
USP47Q96K76 AL513478.4-201ENST00000641636 310 ntBASIC5.66□□□□□ -1.5
USP47Q96K76 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.65□□□□□ -1.5
USP47Q96K76 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.65□□□□□ -1.51
USP47Q96K76 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
USP47Q96K76 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
USP47Q96K76 RNU6ATAC-201ENST00000408749 126 ntBASIC5.65□□□□□ -1.51
USP47Q96K76 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.65□□□□□ -1.51
USP47Q96K76 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.65□□□□□ -1.51
USP47Q96K76 AC092691.2-201ENST00000461787 803 ntBASIC5.65□□□□□ -1.51
USP47Q96K76 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.65□□□□□ -1.51
USP47Q96K76 AC087369.1-201ENST00000520775 996 ntBASIC5.65□□□□□ -1.51
USP47Q96K76 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.65□□□□□ -1.51
USP47Q96K76 AC004777.1-201ENST00000624317 287 ntBASIC5.65□□□□□ -1.51
USP47Q96K76 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.65□□□□□ -1.51
USP47Q96K76 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
USP47Q96K76 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
USP47Q96K76 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.64□□□□□ -1.51
USP47Q96K76 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.64□□□□□ -1.51
USP47Q96K76 AC011266.1-201ENST00000624119 3569 ntBASIC5.64□□□□□ -1.51
USP47Q96K76 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
USP47Q96K76 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
USP47Q96K76 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
USP47Q96K76 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.64□□□□□ -1.51
USP47Q96K76 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
USP47Q96K76 SNORA71.3-201ENST00000362582 128 ntBASIC5.64□□□□□ -1.51
USP47Q96K76 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.64□□□□□ -1.51
USP47Q96K76 AL672167.2-201ENST00000377164 879 ntBASIC5.64□□□□□ -1.51
USP47Q96K76 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.64□□□□□ -1.51
USP47Q96K76 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
USP47Q96K76 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.64□□□□□ -1.51
USP47Q96K76 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.64□□□□□ -1.51
USP47Q96K76 AC022795.1-201ENST00000473808 480 ntBASIC5.64□□□□□ -1.51
USP47Q96K76 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
USP47Q96K76 IGKV2-38-201ENST00000517443 247 ntBASIC5.64□□□□□ -1.51
USP47Q96K76 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.64□□□□□ -1.51
USP47Q96K76 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.64□□□□□ -1.51
USP47Q96K76 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.64□□□□□ -1.51
USP47Q96K76 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.64□□□□□ -1.51
USP47Q96K76 AL583832.1-201ENST00000603227 784 ntBASIC5.64□□□□□ -1.51
USP47Q96K76 AL451086.1-201ENST00000605596 223 ntBASIC5.64□□□□□ -1.51
USP47Q96K76 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
USP47Q96K76 MIR6500-201ENST00000622700 86 ntBASIC5.64□□□□□ -1.51
USP47Q96K76 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.64□□□□□ -1.51
USP47Q96K76 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.64□□□□□ -1.51
USP47Q96K76 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
USP47Q96K76 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
USP47Q96K76 MAPK10-349ENST00000641767 3661 ntBASIC5.64□□□□□ -1.51
USP47Q96K76 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
USP47Q96K76 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.63□□□□□ -1.51
USP47Q96K76 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
USP47Q96K76 RNA5SP387-201ENST00000364226 106 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms